Gene Cpin_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1600 
Symbol 
ID8357742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1946174 
End bp1946752 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content47% 
IMG OID644963780 
Productnitroreductase 
Protein accessionYP_003121297 
Protein GI256420644 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACG GAAATCTGAC GAATATCATC AAGCAACGCC GTAATATCAA ACCGGCAAGC 
ATGAACGGGA AGAGAATTCC CGATGAACAG GTACGTGAAA TACTGGAACT GGCTGACTGG
GCGCCAACAC ACGGCTACAC AGAACCATGG TATTTCGTTG TATTCAGCGG AGAAGGCGTA
AAACAATTCT GTCAGGCACA TGCCGACATT TACAAGGCCA ATACTCCTGC TGAAAAATTT
GCACAGGGAA GCTACGAGAA ACTGCAACAA CAAGGTGATC TCGCATCACA CGTGATTGCA
ATCTGTATGA AGAGAGGCAA CAAACCAGCC ATTCCTGAGC TGGAAGAAAT TGTTGCTGTT
GCCTGCGCTA CACAAAACCT CTGGCTCGGT GCTACCGAAA AAGGACTGGC CGGCTACTGG
GGTTCAGGTG GTATGACCTT CCATCCTTCC ATGAAGGAAT ATCTTTCCTT ACGGGAAGAA
GACAAAGTGC TTGGTTTCTT TTACCTCGGC TATACGGATG AACAAATTCC GGAAGGCAGA
AGACTGAAAC CAGTGGAAGA GAAATTCAAA TGGATGTAG
 
Protein sequence
MENGNLTNII KQRRNIKPAS MNGKRIPDEQ VREILELADW APTHGYTEPW YFVVFSGEGV 
KQFCQAHADI YKANTPAEKF AQGSYEKLQQ QGDLASHVIA ICMKRGNKPA IPELEEIVAV
ACATQNLWLG ATEKGLAGYW GSGGMTFHPS MKEYLSLREE DKVLGFFYLG YTDEQIPEGR
RLKPVEEKFK WM