Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1562 |
Symbol | |
ID | 8357704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1905374 |
End bp | 1905715 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644963742 |
Product | protein of unknown function DUF1508 |
Protein accession | YP_003121259 |
Protein GI | 256420606 |
COG category | [S] Function unknown |
COG ID | [COG3422] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAATC CCAAATTTGA ACTTTTCTCC GGTATCGGGA AGAATGACTA TTTCTTTAAC CTGAAAGCCG GCAATGGAGA GAAAATCCTG GGAAGTGAAA GCTATACCTC AAAACATGCC GCTGTACACA GCATCGCTTC CGTAAAAAGA AACGCTCCAT ATTATAAACA GTACGAACGA AGATTTAATA GTGATAACAA CAGTTACACG TTCGTACTAA AAGCTGAGAA CGGAGAAATT ATCGGTCGAA GTGAGACCTA TCCCTCTGCC TATAGCCGTG ACGAGGGCAT TGAAGCCGTA AGACGAAATG CCCCGGAAGC ACCCACTGAT GATCTGACCT GA
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Protein sequence | MKNPKFELFS GIGKNDYFFN LKAGNGEKIL GSESYTSKHA AVHSIASVKR NAPYYKQYER RFNSDNNSYT FVLKAENGEI IGRSETYPSA YSRDEGIEAV RRNAPEAPTD DLT
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