| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1560 |
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| Symbol | |
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| ID | 8357702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1903299 |
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| End bp | 1904249 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963740 |
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| Product | peptidase C14 caspase catalytic subunit p20 |
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| Protein accession | YP_003121257 |
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| Protein GI | 256420604 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAG CATTAGTAGT CGGAATTGAT GACTATCCCG GCGCCCGCCT CAAGGGCTGT
ATCCATGACG CAAATACAGT AGCAGAACTA TTGGACAAAA ACGCAGATGG CTCGCCAAAT
TTTGAAGTAA AGCTCTTTAC TACAGTAAAG ACAAAAGCAG AGCTGAAGTC CGTTATCCTC
AAAACCTTTA ATGACAGAGA TGATGATATC AATCTGTTTT ATTTCTCCGG TCATGGTAAT
GTGACAGAGT CGGGTGAGGG CTACATTGTT ACCCCCGATT TTACCCGCGA TGATGTTGGT
ATTTCCATGG ATGAAATACT GAAAATAGCA GGGCTGTCAA AGGCAAGACA TAAGATTGTT
ATCCTGGACT GTTGCCATGC CGGGGCCATG GGCTCACCCA CTGTCATATC CAATAGTGCG
GCGTTTCTGG AACAAGGTGT GATCATCCTG GCGTCTAGCC GTAGTTCAGA GACTTCAGTA
GAACGTAATG GCCATGGCGT ATTCACGGGC CTCCTGATCG ACGCCCTGAA AGGAGGCGCC
GCAGATATAG ATGGAGAAGT AACTCCGGGG AATATCTATA GTTATATAGA TAAAGCATTG
GGGAGCTGGT ACCAGCGTCC TGTATTTAAG GCGAATATTG TCCGTTCTGT AAGCCTGCGC
AGCGTGAGGC CCACAGTGTC CAAAGCTGAA TTAAGACTGC TATTGGAGTA TTTCCCTCAG
GCCGACAAAG AGTTTCCGCT TGATCCCAGC TATGAATACA CTACCACAAC AGATACCCCC
AACGAAAAGA ATATCAGTAC GTTTAAAATT CTGCGTAGAA TGCAGCTGAT CGGGTTGGTG
GAGCCTGTAG GAGAGGAGTA TCTGTATTGG GCTGCTGTCC GGAATAAGAG CTGTCGTTTG
ACAGGGTTGG GAGCTTACTA CTGGACATTA ATTAAAAACG GCAGGATATA A
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| Protein sequence | MRKALVVGID DYPGARLKGC IHDANTVAEL LDKNADGSPN FEVKLFTTVK TKAELKSVIL
KTFNDRDDDI NLFYFSGHGN VTESGEGYIV TPDFTRDDVG ISMDEILKIA GLSKARHKIV
ILDCCHAGAM GSPTVISNSA AFLEQGVIIL ASSRSSETSV ERNGHGVFTG LLIDALKGGA
ADIDGEVTPG NIYSYIDKAL GSWYQRPVFK ANIVRSVSLR SVRPTVSKAE LRLLLEYFPQ
ADKEFPLDPS YEYTTTTDTP NEKNISTFKI LRRMQLIGLV EPVGEEYLYW AAVRNKSCRL
TGLGAYYWTL IKNGRI
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