Gene Cpin_1537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1537 
Symbol 
ID8357678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1881670 
End bp1882104 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content42% 
IMG OID644963717 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003121235 
Protein GI256420582 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.510368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATA CTTTTGTAAG CAATCCGTCT TTTTTTAAGC TGGATGCCAC CCTCAAACGG 
ATACGTAATT ACTGGCAGAA AACCTTTGAC GCCAATAAAA AAGATATTAC CGTTGACCAG
TGGCTTCTGA TTGAAAACCT GTACAAGCAT AAGAAGATCA CGCACAATGA GCTTGCCAAA
CTGACCTCAA AAGATATTAC GACGGTATCC CGTATCATTG AACTGCTGGT GAAAAAAGAA
CTGGTAGTCA GAGAGGGATC TCCGCAGGAT CGCAGGAAAG TGTATTTACA GCTGACCAAC
AAAGGCACTG AGAAATATAA GGATGTTCGT CCGCTGGTAT TAGACATGCG TAAAACAGGA
TGGTCCGGAT TAACAGAACA TGATTATACT GAATTGACCA GGATACTGGA CGCTATCTAT
CAAAACATTC CCTGA
 
Protein sequence
MTDTFVSNPS FFKLDATLKR IRNYWQKTFD ANKKDITVDQ WLLIENLYKH KKITHNELAK 
LTSKDITTVS RIIELLVKKE LVVREGSPQD RRKVYLQLTN KGTEKYKDVR PLVLDMRKTG
WSGLTEHDYT ELTRILDAIY QNIP