Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1537 |
Symbol | |
ID | 8357678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1881670 |
End bp | 1882104 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644963717 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003121235 |
Protein GI | 256420582 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.510368 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATA CTTTTGTAAG CAATCCGTCT TTTTTTAAGC TGGATGCCAC CCTCAAACGG ATACGTAATT ACTGGCAGAA AACCTTTGAC GCCAATAAAA AAGATATTAC CGTTGACCAG TGGCTTCTGA TTGAAAACCT GTACAAGCAT AAGAAGATCA CGCACAATGA GCTTGCCAAA CTGACCTCAA AAGATATTAC GACGGTATCC CGTATCATTG AACTGCTGGT GAAAAAAGAA CTGGTAGTCA GAGAGGGATC TCCGCAGGAT CGCAGGAAAG TGTATTTACA GCTGACCAAC AAAGGCACTG AGAAATATAA GGATGTTCGT CCGCTGGTAT TAGACATGCG TAAAACAGGA TGGTCCGGAT TAACAGAACA TGATTATACT GAATTGACCA GGATACTGGA CGCTATCTAT CAAAACATTC CCTGA
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Protein sequence | MTDTFVSNPS FFKLDATLKR IRNYWQKTFD ANKKDITVDQ WLLIENLYKH KKITHNELAK LTSKDITTVS RIIELLVKKE LVVREGSPQD RRKVYLQLTN KGTEKYKDVR PLVLDMRKTG WSGLTEHDYT ELTRILDAIY QNIP
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