Gene Cpin_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1399 
Symbol 
ID8357519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1668242 
End bp1669498 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content48% 
IMG OID644963558 
Productsodium:dicarboxylate symporter 
Protein accessionYP_003121097 
Protein GI256420444 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAT TGTTTCGCCA TCTCTATTTC CAGGTGATTG TAGCTATCTT CCTTGGTATT 
ATCACTGGCG CCCTATTCCC TTCTGCCGCT GCTACCGGTA AAATGATGAG CGAGATTTTC
ATTAATCTGA TCAAAATGCT CATCGCCCCG ATCATCTTCC TGACTATCGT CCTCGGTATC
GCCCGCATGG GTGATATGAA GAAAGTCGGC CGTGTAGGCG GGAAAGCCCT GCTGTATTTC
GAACTGGTGA CCACGCTCGC CATTGTTATC GGACTGATCG TGGCGAATCT CCTGCAACCA
GGTACCGGCA TGAAACCCAG GAACGTGAAC GCGGAACAGG TGGCGAAATA CCAGGAACAG
GCAACTCATT TCAGCTGGTC GGAGTTTCTC ATGCATATCG TACCCTCTAA CGTGGTCGAT
TCCTTTGCTA AAGGAGATAT CATTCAGGTA CTGGTATTCG CAATCCTCTT CGGTTACGGA
CTGACGAAAA TGAAAAGCGT AGGAGACTCC CTGCTGCTGA CTTTCGAAAA ATTGTCAGAA
GTCTTCTTCA ACATACTCAA ATTTATCATG AAACTGGCGC CGATAGGCGC CTTTGGGGGA
ATGGTCTTCA CCGTTGGTAG CTTCGGACTG AGCGCCTTAT ACCCTATGCT GAAGCTAATG
GGATGCGTCT ACCTGACTAT GTTCCTGTTC ATCTTTGTAA TACTGGGACT AATCGCCTAT
AAATATGAAT TCAGTCTCTG GAAATACCTG GTGTTTATCC GGAATGAACT CCTGATCGTA
CTGGGTACCT CTTCCTCAGA ATCCGCCCTG CCAGGTTTAA TGGAAAAATT GGAACGCCTC
GGATGCGCCA GACAGGTAGT CGGACTCGTC GTACCTGCCG GCTATTCCTT CAACCTTGAT
GGCACCAGCA TCTATCTTTC TATGGCAATG ATATTTCTGG CTCAGGTTTC TAAAGTACCT
TTAGATATCT GGCAGCAGCT GACGATCATC GGCATATTGA TGATCACCTC AAAAGGAGCC
GCCGGCATTA CCGGCAGCGG ATTCATCGTA CTGACATCCA CCCTGACAGC TATAAAAGTG
ATACCCCTCG AAGGGCTCGG TATCCTGATA GGAGTGGACC GCTTTATGTC TGAAGCCCGT
GCTATCACAA ACCTTATCGG AAATGGCGTT GCGACGATTG TTATGGCAAA AAGCGAAGAT
GCATTTGACA TGGAAAAATA TATGGCAGCT ACCGGTAAGA AGCAAACAAC CATTTAA
 
Protein sequence
MSKLFRHLYF QVIVAIFLGI ITGALFPSAA ATGKMMSEIF INLIKMLIAP IIFLTIVLGI 
ARMGDMKKVG RVGGKALLYF ELVTTLAIVI GLIVANLLQP GTGMKPRNVN AEQVAKYQEQ
ATHFSWSEFL MHIVPSNVVD SFAKGDIIQV LVFAILFGYG LTKMKSVGDS LLLTFEKLSE
VFFNILKFIM KLAPIGAFGG MVFTVGSFGL SALYPMLKLM GCVYLTMFLF IFVILGLIAY
KYEFSLWKYL VFIRNELLIV LGTSSSESAL PGLMEKLERL GCARQVVGLV VPAGYSFNLD
GTSIYLSMAM IFLAQVSKVP LDIWQQLTII GILMITSKGA AGITGSGFIV LTSTLTAIKV
IPLEGLGILI GVDRFMSEAR AITNLIGNGV ATIVMAKSED AFDMEKYMAA TGKKQTTI