Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1399 |
Symbol | |
ID | 8357519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1668242 |
End bp | 1669498 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644963558 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_003121097 |
Protein GI | 256420444 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAT TGTTTCGCCA TCTCTATTTC CAGGTGATTG TAGCTATCTT CCTTGGTATT ATCACTGGCG CCCTATTCCC TTCTGCCGCT GCTACCGGTA AAATGATGAG CGAGATTTTC ATTAATCTGA TCAAAATGCT CATCGCCCCG ATCATCTTCC TGACTATCGT CCTCGGTATC GCCCGCATGG GTGATATGAA GAAAGTCGGC CGTGTAGGCG GGAAAGCCCT GCTGTATTTC GAACTGGTGA CCACGCTCGC CATTGTTATC GGACTGATCG TGGCGAATCT CCTGCAACCA GGTACCGGCA TGAAACCCAG GAACGTGAAC GCGGAACAGG TGGCGAAATA CCAGGAACAG GCAACTCATT TCAGCTGGTC GGAGTTTCTC ATGCATATCG TACCCTCTAA CGTGGTCGAT TCCTTTGCTA AAGGAGATAT CATTCAGGTA CTGGTATTCG CAATCCTCTT CGGTTACGGA CTGACGAAAA TGAAAAGCGT AGGAGACTCC CTGCTGCTGA CTTTCGAAAA ATTGTCAGAA GTCTTCTTCA ACATACTCAA ATTTATCATG AAACTGGCGC CGATAGGCGC CTTTGGGGGA ATGGTCTTCA CCGTTGGTAG CTTCGGACTG AGCGCCTTAT ACCCTATGCT GAAGCTAATG GGATGCGTCT ACCTGACTAT GTTCCTGTTC ATCTTTGTAA TACTGGGACT AATCGCCTAT AAATATGAAT TCAGTCTCTG GAAATACCTG GTGTTTATCC GGAATGAACT CCTGATCGTA CTGGGTACCT CTTCCTCAGA ATCCGCCCTG CCAGGTTTAA TGGAAAAATT GGAACGCCTC GGATGCGCCA GACAGGTAGT CGGACTCGTC GTACCTGCCG GCTATTCCTT CAACCTTGAT GGCACCAGCA TCTATCTTTC TATGGCAATG ATATTTCTGG CTCAGGTTTC TAAAGTACCT TTAGATATCT GGCAGCAGCT GACGATCATC GGCATATTGA TGATCACCTC AAAAGGAGCC GCCGGCATTA CCGGCAGCGG ATTCATCGTA CTGACATCCA CCCTGACAGC TATAAAAGTG ATACCCCTCG AAGGGCTCGG TATCCTGATA GGAGTGGACC GCTTTATGTC TGAAGCCCGT GCTATCACAA ACCTTATCGG AAATGGCGTT GCGACGATTG TTATGGCAAA AAGCGAAGAT GCATTTGACA TGGAAAAATA TATGGCAGCT ACCGGTAAGA AGCAAACAAC CATTTAA
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Protein sequence | MSKLFRHLYF QVIVAIFLGI ITGALFPSAA ATGKMMSEIF INLIKMLIAP IIFLTIVLGI ARMGDMKKVG RVGGKALLYF ELVTTLAIVI GLIVANLLQP GTGMKPRNVN AEQVAKYQEQ ATHFSWSEFL MHIVPSNVVD SFAKGDIIQV LVFAILFGYG LTKMKSVGDS LLLTFEKLSE VFFNILKFIM KLAPIGAFGG MVFTVGSFGL SALYPMLKLM GCVYLTMFLF IFVILGLIAY KYEFSLWKYL VFIRNELLIV LGTSSSESAL PGLMEKLERL GCARQVVGLV VPAGYSFNLD GTSIYLSMAM IFLAQVSKVP LDIWQQLTII GILMITSKGA AGITGSGFIV LTSTLTAIKV IPLEGLGILI GVDRFMSEAR AITNLIGNGV ATIVMAKSED AFDMEKYMAA TGKKQTTI
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