| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1371 |
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| Symbol | |
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| ID | 8357490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1638442 |
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| End bp | 1639992 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963529 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003121069 |
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| Protein GI | 256420416 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.768214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAAG GATTTAACAC TGCAATGGCA AATACACTGC TAGGTGAAGC GGGCATCTCG
TCTGCCGGAC TACTGGAGCA ATTGCCGGTG GCAGCTTATA TATGTGATGT GAATGGCGGC
ATCATATGTT GCAATGCGCG CGCTGTAAAA TTGTGGGGAA GAACACCCTC TGCGGGGGAA
ACCATATTTC ATGACAGTAC GGTGATCGCT GCTGTATTAG AGGAGGGATT ACCCTTAGAA
GATTGGCAAT CAACGATTAG TCATGCTGAT GATACTTCAG TGATCGTCAG GGGGAGTATT
ACGCCGCTAA AAGACGGGGA TGGGAGCGTG ATCGGACTGA TACATTGTTT TGAGAAAGTG
GCCGTAACCA TTGTTCCGGG TACAGAAATA CGGGCCGGTC ATCTCGCAGA ACTGAATGAG
CAGCTTCAAC AGAGTGAGGA GAGATATTAT AAGATGATCG AAGAGGTGGA AGATTACGCC
ATACTCTCCA TGGATAGATC AGGGATTATT CAGAACTGGA ACAAAGGCGC TGAAAAGATT
AAGGGATACC ATGAATCTGA AATTGTCGGC CGGCACTTTA GTGTGTTTTA TCTACCGGAA
GACCGTAAAC GACAATTACC GGAACAATTG ATTTCGGAAG CGATGAAGAC CGGAAAAGCG
GCACATGAAG GCTGGCGGAT GCGTAAAGAC GGGACCCGTT TCTGGGGCAG TATTGTTATT
ACAGCTTTAC ATGACGCAGA CCGGCAGGTG ATCGGCTTTT CAAAAGTCAC CCGCGACCTT
ACAGAAAGAA AGCTGGCGGA AGACAGGATC CGACAGTATG CAAGCGACCT GGAATTTCAG
AACAGGGAGC TGGAACAATT CGCTTATGCA GCGGCTCATG ATATGAAAGA ACCACTTCGG
AAAGTACAGT TCTACAATAA CTATATCAAT GACAATGCAG CAGATGCATT ACCGGAAAAG
GCGCGGGAAT ACCTGCACCG TTCCATTAAT GCAGCCTCCC GGATGCAGGG ACTCATTGAC
GATCTGCTGA TGTATTCGCA GGCATCAGCC TTTTCTAAAG AACCCGAAGA CGTAGATCTG
ACTACCATTG TAAATGAGGT ATTGGAGGCT CACCAGCCTA CAATAGACAA ATTGAAGGCG
GTCGTCCATC TGGACCCCTT GCCGGTGATG CGTGTCATTC CGTTCCAGTT TAGTCAACTA
TTTGATAACC TGATCAGTAA TGCACTCAAA TACCATCACC CTGAACGCCA TCCCCATATC
AACATTACTA TTACAAAAAC GCAGTTGCCT GCAGAGGATA TCCTTCTTAA CAATGCGGAG
CTGAATGGAT ATAAATTATC TGTATCCGAT AATGGGATCG GTTTTGAATC TGACCATGCA
GAAAAGATAT TCGATGTATT CCAGCGTTTG CATACCCTGC CGGATATTGC CGGTACGGGT
ATCGGACTGG CCATCTGTAA AAAGATCGTG CTGAATCATC GCGGGCAAAT TAAGGCATAT
GGCATACCGG GTATCGGCGC TACCTTCGAT ATCTTCATTC CGATTGAATA G
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| Protein sequence | MEQGFNTAMA NTLLGEAGIS SAGLLEQLPV AAYICDVNGG IICCNARAVK LWGRTPSAGE
TIFHDSTVIA AVLEEGLPLE DWQSTISHAD DTSVIVRGSI TPLKDGDGSV IGLIHCFEKV
AVTIVPGTEI RAGHLAELNE QLQQSEERYY KMIEEVEDYA ILSMDRSGII QNWNKGAEKI
KGYHESEIVG RHFSVFYLPE DRKRQLPEQL ISEAMKTGKA AHEGWRMRKD GTRFWGSIVI
TALHDADRQV IGFSKVTRDL TERKLAEDRI RQYASDLEFQ NRELEQFAYA AAHDMKEPLR
KVQFYNNYIN DNAADALPEK AREYLHRSIN AASRMQGLID DLLMYSQASA FSKEPEDVDL
TTIVNEVLEA HQPTIDKLKA VVHLDPLPVM RVIPFQFSQL FDNLISNALK YHHPERHPHI
NITITKTQLP AEDILLNNAE LNGYKLSVSD NGIGFESDHA EKIFDVFQRL HTLPDIAGTG
IGLAICKKIV LNHRGQIKAY GIPGIGATFD IFIPIE
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