| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1329 |
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| Symbol | |
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| ID | 8357447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1586734 |
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| End bp | 1587255 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644963487 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_003121028 |
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| Protein GI | 256420375 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.681853 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATT ACTTCAGCAT AGGAAAACTG GTATCCGTAT TTGGTTTACA GGGGGAATTC
ATTCTCAAGC ATAGTCTGGG AAAAAGAACA GCCCTGCAGG GAGTGGATGC TATCTTCCTG
GAAGAGCGTA AGAACAGTTT TATCCCTTAT TTCATACAGA AATCCAGCGT GAAAGACCAT
GAACACATGT TCGTCAAGCT GGAAGGGGTA GATACCAAAG AAGACGCCCG CAGACTAGTA
CAAACGCCTG TATACCTGCT GGAGGATGAT TTCAAAAAAC AGACGTCCGC ATCAGCCCCG
CTTTCCATGT TGGGCTTTAT GGTGAAAGAC AAGCAGCAGG GAGAACTGGG TGTTATCGAA
GAAGTAATTG AAATGCCCAT GCAGGTGCTG GTTAAAGTAA TGTACAGGGA AAAAGAGGCT
CTGTTGCCAC TCAATGAGCA ATCGCTCATA AAAGTGGATA AAAAGCAGCA GATCGTTCAC
GTCGACCTTC CTGATGGCTT ACTGGACCTT TACCTGGAGT AG
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| Protein sequence | MNNYFSIGKL VSVFGLQGEF ILKHSLGKRT ALQGVDAIFL EERKNSFIPY FIQKSSVKDH
EHMFVKLEGV DTKEDARRLV QTPVYLLEDD FKKQTSASAP LSMLGFMVKD KQQGELGVIE
EVIEMPMQVL VKVMYREKEA LLPLNEQSLI KVDKKQQIVH VDLPDGLLDL YLE
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