Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1275 |
Symbol | |
ID | 8357391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1525662 |
End bp | 1526501 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644963431 |
Product | beta-lactamase domain protein |
Protein accession | YP_003120974 |
Protein GI | 256420321 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.288656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTAT ATACAATAGA GACGGGCAAT TTTAAACTGG ACGGTGGCGC TATGTTTGGC GTTGTACCTA AAAGTATCTG GAATAAACTG AATCCGGCGG ATGAAAATAA CATGTGCTCC TGGGCCATGC GTAGTCTGCT GATAGAGGAT GGCGACCGCC TGATACTGAT AGACACCGGC ATTGGTAATA AACAGGACGA AAAGTTCTTC AGCCATTATT ACCTGCATGG TAACGATTCG ACCGATCAGT CACTGGCAAA ACATGGCTTC AGCCGCAATG ACATTACAGA CGTATTTCTG ACACATCTGC ATTTTGATCA TTGTGGAGGT TGTATAGAAA GACAGGGCGA TAAACTGGTA CCTGCATTTA AAAATGCGGC CTATTGGAGC AATGAGGAAC ACTGGCAATG GGCAACTAAA CCCAATGAGC GTGAAAAAGC CTCCTTCCTG AAAGAGAACA TCCTCCCTAT CCAGGAAAGC GGTCAGCTGA AATTTATTCC CAGAGAAGAA GGCATTCCTT TCAGCAACGA TTTCAACGTC CGTTTTGTAC TTGGTCACAC TGATTCCATG ATGCTGCCAC AGATCCAGTA TAAGGATAAA ACACTCCTGT ATATGGCCGA TCTGTTGCCA AGCAAGGGGC ATATTCCCAT CCCTTATATC ATGTCTTACG ATATGTTCCC GATGACAACC CTTCAGGAGA AAAAAAATTT CCTCCAGGAG GCCGTTGAGA ATAAATATAT TCTGTTTTTT GAACACGATC CTGTGACAGA GTGTTGCACG GTGCAGATGA CCGACAAAGG CATCCGGGTA GCAGATACAT TCAGACTGTC TGATGTATAA
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Protein sequence | MKLYTIETGN FKLDGGAMFG VVPKSIWNKL NPADENNMCS WAMRSLLIED GDRLILIDTG IGNKQDEKFF SHYYLHGNDS TDQSLAKHGF SRNDITDVFL THLHFDHCGG CIERQGDKLV PAFKNAAYWS NEEHWQWATK PNEREKASFL KENILPIQES GQLKFIPREE GIPFSNDFNV RFVLGHTDSM MLPQIQYKDK TLLYMADLLP SKGHIPIPYI MSYDMFPMTT LQEKKNFLQE AVENKYILFF EHDPVTECCT VQMTDKGIRV ADTFRLSDV
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