| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1267 |
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| Symbol | |
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| ID | 8357383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1516175 |
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| End bp | 1518592 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644963423 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003120966 |
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| Protein GI | 256420313 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0311694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTT GTAAAAAGAC AGCGTCACTG TTACTATTGT CTGTACTCAT TCACCTACAG
GTGTCAGCCC AGTTACAGAT TAGAGGAACA GTGAAGGAGG ATAGTACGCA GTTACCTATC
GCATATGCTA AAATTACTGT GTTGAATCTG CCCGATTCGA CAATAGTTGC CAATGCCGAA
AGCGATGCTG CAGGTGGCTA TGAAATCAGA CACCTGAAGA AAGGAAACTA CGCACTGAAA
GCAGTGTTAA TCGGCTACAG GGAAGTATCT GTTCCGTTGA ATCTTACCAC CACTGATAAC
AATATTGCAG AACAGTCGCT GGTATTGAAA AGAGACCCTC GTCTGTTAAA AGAAGTGACT
GTCGCATCGC GAAAGCCACT GATAGAATAT AAGATCGATA AAATAGTACT GAACGTAGAG
AAGAGTATCC TGACAAACGG GAACTCTGTA TGGAATCTCC TGGGTAAATC ACCCGGTGTG
GAAACCAGTG GCAGTGCAGT ATCTATACTC GGTACTACAG GCGCTGTAGT ATTGATAAAT
GGTAAATCAA CTTATCTGCG CGGAGAACAA CTGAGCAACA TGCTGAGAGG TATGGCAGCC
GATCAGGTAA GTCAGATAGA GATCATTAAA CATCCTTCTG CCCGCTATGA AGCAGGACAA
GGTGTTGGTG TGGTGAATAT CAGAACAGTA AGGAACCAGG CGGAAGGTAT GAATGGAACC
GCGTCTTTTA CATACGGACA GGGAAAATAT GATAAATACA GTCCCGCGGT AAACCTGAAC
TATAAAGTAG GAAAGCTGAA TGCTTATGCG AACTATTCTT TCATGAGCAT TAAAGATTAT
CAGCGGCAAC CATCTTATGT TAATTATGCT GATCAGACAG TTCCGGTGTA TTTCGATCAA
CAACAATATG CGCGTACAAT CAACAGATCG CATACGCTGA TCGGCGGACT GGATTATACC
ATCAACGCCA AGCATACAAT AGGTTTTCAG GTCAATGCCC AGCGGGTACG CAGGAAAAGC
CAGTATGATA ATGATACTTA TATCTGGAGC AAAGGCAATA TAGATTCTAT TGTACATACT
AACAGCGCCA TCAGATATCC GTCAGGTGTG CAGTTGTATA ATGTGTACTA TAATCTGACA
ATGGGTGCGA AAGGATCCCT GAGTGTAAAT GCAGACTATG CACATTACAA CGCGGACAAT
GGACAGGACT ATTTCTTTTC CTACTTCAAT CCAAATATGG AGGAACGAAA ACCCTCTGCT
TACTTCAGGA ACGAAGCGCC TGTAAAGCTG AATGTAAAAG GCATTACCGT CGATTTTATA
AGAAAGCTGA AGAACGATTA TACCCTGGAA CTGGGCGCCA AAAGCACCTG GATGGAGAAT
AACAGCGACC TCGTTTACGC GGAATTGGAA GGGGATAAAT ACAGGGTAGA TACTGCACAA
CTGAATAAGT TTGACTATAC AGAAAATGTC AATGCCGCCT ATTTTAACCT GGAAAAGGCA
TTTAAGAAAT GGACGGTAAA GGCAGGTACA CGTGTGGAAC AGACCATTGC AAAAGGTAGT
GTGTTAAGGC AGAACGATAT CGTTGACAGG AATTATTTCA GGGTATTCCC GTCTGTGTTC
GCACAGTATG TGGTCAATAA GAACCATGAA TTTAATTTTT CTTACACCAC GAGCTTTGAG
CGGCCGAATT ATAATTATCT CAGTCCGCTG GCCATCCGGA GAGATCCCAA TGCTTATTCA
ACGGGTAATC CTTTCCTGAA GCCTTCTTAT ACCAATACGC TGGAACTGGC TTATATATTC
AGGAAGAAAT ATCGCGTAGC GATCGAGATA GATAATATCA GCGACAGGAT TGAACAGTCA
GTACAGCAGC ATTATGATAC ACAGTCATTG CAGAATATCA TTGCAAATAT TGATCACTGC
TATTACTACC GTATTTACTT TATTATTCCT GTCACAATCA CGAAATGGTG GCAGAGTAAT
ATCACCTGGA ATAATTACCT GATACAGTAT AAGACGCCTT ATCTGAATGG TACTTATAAC
ATCACGAAAC CGGTATTTTA TATCAACGCG AATAATACAT TTCCTATATC TAAGAGTGTG
ACGGCAGAGA TGACAGCTTA TTACAGAACG CCATCGCTGA ATGGTTTGTA TGAAGTAGGT
ACACGTTTCT TTGTGGATGC AGCTATCCGT AAAACATTCT CTGCAAAGTT TGCAGCCGTG
TTAAGTGTAA CGGATATCTT CTATACCAAC AGGTGGCAGT GGGACATCAA CTACCTGGAC
CAGCACTCCG GATACAAAAC CTATACCGAT TCAAGGGTTG TTAAACTGAA CCTCAGTTAT
AAGTTTGGCA ACAGTAAACT GAGAACTGCC AAGAGACATA CCATCGGTAT CGGCAGCGAA
AGGGATAGAA TGAGATAA
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| Protein sequence | MSACKKTASL LLLSVLIHLQ VSAQLQIRGT VKEDSTQLPI AYAKITVLNL PDSTIVANAE
SDAAGGYEIR HLKKGNYALK AVLIGYREVS VPLNLTTTDN NIAEQSLVLK RDPRLLKEVT
VASRKPLIEY KIDKIVLNVE KSILTNGNSV WNLLGKSPGV ETSGSAVSIL GTTGAVVLIN
GKSTYLRGEQ LSNMLRGMAA DQVSQIEIIK HPSARYEAGQ GVGVVNIRTV RNQAEGMNGT
ASFTYGQGKY DKYSPAVNLN YKVGKLNAYA NYSFMSIKDY QRQPSYVNYA DQTVPVYFDQ
QQYARTINRS HTLIGGLDYT INAKHTIGFQ VNAQRVRRKS QYDNDTYIWS KGNIDSIVHT
NSAIRYPSGV QLYNVYYNLT MGAKGSLSVN ADYAHYNADN GQDYFFSYFN PNMEERKPSA
YFRNEAPVKL NVKGITVDFI RKLKNDYTLE LGAKSTWMEN NSDLVYAELE GDKYRVDTAQ
LNKFDYTENV NAAYFNLEKA FKKWTVKAGT RVEQTIAKGS VLRQNDIVDR NYFRVFPSVF
AQYVVNKNHE FNFSYTTSFE RPNYNYLSPL AIRRDPNAYS TGNPFLKPSY TNTLELAYIF
RKKYRVAIEI DNISDRIEQS VQQHYDTQSL QNIIANIDHC YYYRIYFIIP VTITKWWQSN
ITWNNYLIQY KTPYLNGTYN ITKPVFYINA NNTFPISKSV TAEMTAYYRT PSLNGLYEVG
TRFFVDAAIR KTFSAKFAAV LSVTDIFYTN RWQWDINYLD QHSGYKTYTD SRVVKLNLSY
KFGNSKLRTA KRHTIGIGSE RDRMR
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