Gene Cpin_1241 details

Gene Information

• Locus tag: Cpin_1241
• ID: 8357357
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chitinophaga pinensis DSM 2588
• Kingdom: Bacteria
• Replicon accession: NC_013132
• Strand: +
• Start bp: 1487716
• End bp: 1488111
• Gene Length: 396 bp
• Protein Length: 131 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 644963397
• Product: histidine triad (HIT) protein
• Protein accession: YP_003120940
• Protein GI: 256420287
• COG category: [F] Nucleotide transport and metabolism; [G] Carbohydrate transport and metabolism; [R] General function prediction only
• COG ID: [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 41
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCTGTTT TCACAAAGAT CATCAAAGGC GAAATACCCA GTTATAAGAT AGCCGAGAAC 
GATAGTTTTT ATGCATTTCT GGACATCTTT CCGTTAGTGA AAGGTCATAC GCTGATAGTG 
CCTAAAGTAG AGATAGACAA GTTTTTTGAT GTAACGGATG ATCTGCTGGG TGAGTGGTTG 
CTGTTTGCGA AACCTATTGC ACAATCGATA GAGCGTAACT TTCCCTGTAA TCGTGTAGGT 
ATAAGCGTTG TAGGGCTTGA AGTGCCTCAT GCGCACATGC ATCTGATACC TATCAACACG 
GCGGATGATA TGAATTTTGC GCGGCCCAAG CTGAAAATGA CAGAAGAGGA ATTCAAGGCT 
GTACAGCAGC AGATTATAGC TGGCCTGGAA CGTTAA 

 

Protein sequence

MSVFTKIIKG EIPSYKIAEN DSFYAFLDIF PLVKGHTLIV PKVEIDKFFD VTDDLLGEWL 
LFAKPIAQSI ERNFPCNRVG ISVVGLEVPH AHMHLIPINT ADDMNFARPK LKMTEEEFKA 
VQQQIIAGLE R