| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1229 |
|---|
| Symbol | |
|---|
| ID | 8357345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 1475497 |
|---|
| End bp | 1476639 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644963385 |
|---|
| Product | ATP synthase F0, A subunit |
|---|
| Protein accession | YP_003120928 |
|---|
| Protein GI | 256420275 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
|---|
| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.896245 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATTTCCT ACACTCTGTC CAAATATAGA CTGGTAGCCC TTATTCTTGC ATTTTGCATA
AGCGGTTTTA ACACGTTTGC GAATACTTCA GAAGCTCATG AGGAGCCGAA GAAGGGTTTT
GACGCCAAAG AGGTACTTCT TGGCCACGTT AAGGATGCCC ATGACTGGCA CCTGTTCAGC
CTTGGAGAGT CACATGTGAC TCTGCCTCTG CCTGTTATTA TCTACAGCAA AGAGAAAGGC
ATCAGCAGCT TTTCTTCCTC AGCGTTCCAT CATGGCCATG CGTCTCATGA AGGTTATCGT
CTGGTAAACA AGCACTACCG TGAGGAAAAG AGGCTCGAAG AGTCAAAGTA TCCTGACGAG
AGGATCATTG CAGTAGATGC AAATGATAAT CCGACCGGAG CTGAAATCTA CGATCTGTCT
ATCACGAAGA ACATCACTTC CATGATCATC GGAGCGATCC TGCTGATCTG GCTGATGACC
TCTGTAGCGA AAGCTTATAC AACAAGAGGT TCCAAGAAAG CGCCTAAAGG TTTGCAGAGC
CTGTTGGAGC CGGTGATCAT CTTCATCCGT GATGAAGTGG TAAAACCGAA CATTCCAGGT
CTCAGTGCAG AACGTTATAC TCCGTTCATT CTGACCTTCT TCTTCTTTAT ATTAATCAAT
AACCTGCTGG GTCTGTTACC AGGTTCTGCT AACGTAACCG GTAATATTGC TGTGACATTC
GCCCTGGCGC TGATCAGCTT TATTGCAACT ATGGTTAGTG CTAATAAGCA TTTCTGGTCT
CACATACTGA ACCCACCGGT TCCAGGCTGG GTTAAACCGA TCCTGGTGCC TGTAGAGATC
ATCGGTATCT TCACTAAGCC GGTGTCTCTG ATGATCCGAC TGTTTGCCAA CATCCTGGCA
GGTCACATCA TCATCCTGAG CATTATCTCC CTGGTATTCA TCTTTGGTTC CATCAACAAG
GCGGCTGGTT ACGGTTTCTT ACCGATCACC ATCCTGTTCA ACATCGTCAT GATGATGCTG
GAACTGCTGG TTGCTTTTAT CCAGGCATTC ATCTTCGCTA ACCTGACAGC GGTATTCATC
GGTCAGGGTA TGGAAGTGGC TCACCACGAT GATCATCATG CAGGTGACAA CAAGCACCAT
TAA
|
|---|
| Protein sequence | MISYTLSKYR LVALILAFCI SGFNTFANTS EAHEEPKKGF DAKEVLLGHV KDAHDWHLFS
LGESHVTLPL PVIIYSKEKG ISSFSSSAFH HGHASHEGYR LVNKHYREEK RLEESKYPDE
RIIAVDANDN PTGAEIYDLS ITKNITSMII GAILLIWLMT SVAKAYTTRG SKKAPKGLQS
LLEPVIIFIR DEVVKPNIPG LSAERYTPFI LTFFFFILIN NLLGLLPGSA NVTGNIAVTF
ALALISFIAT MVSANKHFWS HILNPPVPGW VKPILVPVEI IGIFTKPVSL MIRLFANILA
GHIIILSIIS LVFIFGSINK AAGYGFLPIT ILFNIVMMML ELLVAFIQAF IFANLTAVFI
GQGMEVAHHD DHHAGDNKHH
|
|---|
| |