| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1228 |
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| Symbol | |
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| ID | 8357344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1471596 |
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| End bp | 1475369 |
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| Gene Length | 3774 bp |
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| Protein Length | 1257 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644963384 |
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| Product | transglutaminase domain protein |
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| Protein accession | YP_003120927 |
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| Protein GI | 256420274 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.435864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTGCT TTAAAAAGTT TATTGTTGTC TGTACGCTGT TATCGCTCTT CTCGTTTGTT
GCCGCTTTCG CAGGAGATTA TGAAAAAGCA TGGGACGCAC TTAACAAAAA GGACAAAACT
CGCGCAGTCG AGTATTTCAG GAAAGCGCTG AAAAGCGATC CTGCGAAAAA GAACAATGCC
ATAGCGGCAT TGATATTACT GGAGGCTTAC GAAAGCAACA GTGAAACGTT TCTTGACAAG
TATCCCAATC CCCTGGATGT ACTGACTGAA GTAAACCCTT ACGTATATGC CTTGTGGTTT
AATGATGCTG TACTTGGCGA ATATGGGTTC AAGACCGGAA AACAATTATC CAATCTCAAC
AGGATTCTCA ATGAACCCCG CTTCAATGGT TCACTGAAAG CTGCCGCTAC TTACTACAAA
GGGCTGCATT TTATTCACGG ACAGCGCCGG GACAGTGCTG AATGGTATTA TGCGAGGATC
GGCGCCTTAC GTAACTGGCA GTTTGTCGGC GTGTTTGATA ACATCAGCGG AAGTGGTTTC
AATAAAGACT ACGCCCCTGT AAAGGAATCT AAGGCTGGTA AGGGCTTTTC TTCTTACAAC
AATACTACTA TAGACTGGTT TAAGCCATTA TTTGCAGATG ATGCCGGATG GTCATTTGTG
GGTTCATTAT TCGCTTCCAA AACGGGCGTA GGATATGCGC AGACATTTGT GTACGCGGAT
GCAGATAAAG ATGCGATCAT TTCCACAGGA GGCAGAGGTT CTCAGAAGGT ATGGGTCAAT
GATAAATTGC TCATGTCAGA AGAGGAAGAG CTGACCACAG AAATGGATAA ATACAGCGCC
AGATGTCATC TGAAAAAAGG ATATAACCGT GTGTTGGTAC AGATCGGTTT TACCAATGAT
AACATACCCA ATTTTATAGT TCGCTTAACA GATGATAAAT ATGCACCATT AAAGGGGATC
ACTGGTACCA GCGATCTGCA GGAATACCAG GTTGACAAAA GCACGGATGC CGTAATCAGA
CTGCCGCATT TTGCAGAAGT GTACTTTAAA GAGCAGATGG GAAAGTATCC GCAGGATCCG
ATTTTTCCAA TGCTGCTTGC TAAAGTATAT ACCCGTAATA CAGAGCATGA TAAGGCCAAG
GAGGCCATGC ATGGTCTGTT TGTAAAGTAT CCGGAGAATC CGCTGGTATT GTATCAATAC
ATAGAGGGCT TGTCTTATGA ATACGACAGA ACGGCTATTT CAGAATTGTC AGAGAAAATC
AAACTGCTGG ATCCTGAAAA CTACCAGGTA AGAGCAACGG AAGAAAGTCA GCTGGAAAAG
GAAAAGAAGT ACAGTGAAGC GCTCGATCTT GTGAATAAGA TGGAAGCAAC GAATGGCGAG
AAGATTACAA CTGTACTGAA GAAATTATAT CTGAATGCTT ATCTGCAACG CATAGACAGC
ATGATTGCAT TGTTGAAGAC TGCGTATGAA AAGTATCCAT CGCATCCGGC GATAGCGACG
ATCATGTATC AGTACAAAAT GCAGATGGTA AAAGAACCCG CAGAAGCGTT GAAAGTACTG
GAGACCTATC AATCGTCGTA TTTCAACAGT GAGCTTGGGT ATGAATTAGC GAATGTGTAT
TTTCAGCAGA ATGAAATGGC AAAAGGAGTG GCGACATTGA AACGTATGGC GGCTATGGCG
CCTTATGATA TTGATGTGTA TGAGCCGCTG GTAAAACATT TCTTTGCAAG GCAGGAATAT
GATTCTGCCA TCTACTATCT GCAGATACAA CATCAGATCA GTCCTTACCG GCATCAGCCG
CTGGGTGATA TTGCCAGTGC TTATTTACAG AAAGGGGATA AGCAGAAGGC GCTTGAATAT
TACAAACAGG CGTTGAGCCT GTATTCCGGC GCTTATACAT ATCGCGAGAA AATACGTGAA
CTGGAAAATA AACCGGATGT GTTCAGTTAC TTCCCGCAGA CCGATTACTA TGCAGAGATC
AGTAAATACC TGAAGTCTAA GAAAGACACT GCAAAGAGTT ACAGTTACGT ATTCAATGAC
AATAAAGTCG TGCTGTATGG AGAAGGCGCA AGTGAACGCG TGATGAACTC TGCGGTCTAT
ATCAACAACA AAGAAGGGCT GGATTACTGG AAGGAAATCC GTATTCCTTA CAACAGTGTG
TATGAAGATC TGACGATTGT TAAAGCAGAA GTGGTGAAGG CGAGTGGTGC GAAGATACCT
GCTGAGACAT ATGACAATGA GCTGGTATAT ACCCGTCTGG AACCAGGCGA TATCGTGTAC
CTGAGCTATA AACTCAGTAG TTATGGGATC GGTCGTCTGG GACGTGAATA CTGGGATAAA
TTTTATTTCT CAGCCTTCAA TCCGACGCTG ACGGCCAGGT ATAGCGTATT GGTAGCAGAC
CAGGTGCCGA TCTACTATGA GCTGGTCAAT AATGTGAATG GAATCAAGCC GGTGGAAAGC
AAGCATGAGA ACTTCCGTTT GTATACGTGG GAAATGAAGA ATCTGCCGGT GTTGAAGGAG
GAAAGTTATA GTCCGTCAGC AAGCGATATC GGTAGTGTAC TGCACGTGTC TACTGTGAAG
TCCTGGGATT ATATTGCGGA GTGGTACAGC GATATCACAC GTATTCAATC CAAAGAAGAC
TTTGACATCA ATGCTGCCTA TAAAGAGATA TTCCCTTCAG GTATTGCAGG GCTGAACGAG
TATGAGAAGG CGCAGCGTAT TTACAATTAC ATAGAGAAAA ACATCAGCTA CAGTTCTGTT
TCCTTCAGAC AGGGTGCTTA CATCCCACAG CGAGCCTCTA AAACGCTGAA TACCCGTCTG
GGTGACTGTA AAGATTTATC AGCGTTATTT GTATCGTTTG CCCGTAAGGC GGGTATGGAT
GCTAACCTGG TACTGGTGAG CACCCGTGGT AATGGTCAGC GCAGTATGCA GTTGCCATCC
ATGGAGTTTA ACCATTGTGT AGCAAGGTAT AAGGATGGGG CGAACTACCG TACACTGGAA
CTGACGGATA ATCACCTGCC ATTCAATGCG ATGCCACAGA GTCTGGCAGG GGCACAGGTA
CTGAATATTC CTTATGAGTA TAAAAGCGGA GAGCTCATAC AGTTATATGA GCCTACAGCT
AACTTCAACG TCATCAAGCA TCGTCGTAGT AAGATCCTGG TAGATAACGC TGACCTGCAT
ATTAATACGG TGGTGACTAC CAATGGGGAG GTCGCGTCCG GTTTTCGCAA CAGTTATGGC
GAAAAAGCGC AGGACGAGCT GAAGCAGGAT CTGCAGGAAG CGGTGTCCGG ACAGTTCCGT
AATCCGGTGA CACTGGAGAA GTTTGCTTTC CGGAACCTGG ACAATCTGAG TGATACGGTG
ACGATGGATG AAACCTATAC AGTAAAGAAT GACGTCATCA GCGTAGGGGA CCTGAGTATG
CTGAAGCCGC CGTTACTGGA CATAGTAGCG ACGGTGGATA TCTTCAATAA CGAAGCACGT
CAGTATCCGT TTGAGTACTG GAAGTATGAG AATGTAGACA GCTATAACAC GGAAGTGGAG
ATAGAGCTGC CGGCGGGAAA AGCCTTTGAT CAGGTACCTT CCGACGTGCA GGCGAGCTTC
GGGAATATGA AATATGAGCT GACATATATT AAACCTGCTC CTAATAAGTT GTTAATCAAG
CGGGTGTTTC AAACAAATAT CCGGGACAAC ATACAGCCGG AAGCGTTCCC GAAGATGAAA
GAATTCTTCA ATTTAATTGT AGCCGCTGAG CAGAAATATG TTTCATTTAA GTAA
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| Protein sequence | MSCFKKFIVV CTLLSLFSFV AAFAGDYEKA WDALNKKDKT RAVEYFRKAL KSDPAKKNNA
IAALILLEAY ESNSETFLDK YPNPLDVLTE VNPYVYALWF NDAVLGEYGF KTGKQLSNLN
RILNEPRFNG SLKAAATYYK GLHFIHGQRR DSAEWYYARI GALRNWQFVG VFDNISGSGF
NKDYAPVKES KAGKGFSSYN NTTIDWFKPL FADDAGWSFV GSLFASKTGV GYAQTFVYAD
ADKDAIISTG GRGSQKVWVN DKLLMSEEEE LTTEMDKYSA RCHLKKGYNR VLVQIGFTND
NIPNFIVRLT DDKYAPLKGI TGTSDLQEYQ VDKSTDAVIR LPHFAEVYFK EQMGKYPQDP
IFPMLLAKVY TRNTEHDKAK EAMHGLFVKY PENPLVLYQY IEGLSYEYDR TAISELSEKI
KLLDPENYQV RATEESQLEK EKKYSEALDL VNKMEATNGE KITTVLKKLY LNAYLQRIDS
MIALLKTAYE KYPSHPAIAT IMYQYKMQMV KEPAEALKVL ETYQSSYFNS ELGYELANVY
FQQNEMAKGV ATLKRMAAMA PYDIDVYEPL VKHFFARQEY DSAIYYLQIQ HQISPYRHQP
LGDIASAYLQ KGDKQKALEY YKQALSLYSG AYTYREKIRE LENKPDVFSY FPQTDYYAEI
SKYLKSKKDT AKSYSYVFND NKVVLYGEGA SERVMNSAVY INNKEGLDYW KEIRIPYNSV
YEDLTIVKAE VVKASGAKIP AETYDNELVY TRLEPGDIVY LSYKLSSYGI GRLGREYWDK
FYFSAFNPTL TARYSVLVAD QVPIYYELVN NVNGIKPVES KHENFRLYTW EMKNLPVLKE
ESYSPSASDI GSVLHVSTVK SWDYIAEWYS DITRIQSKED FDINAAYKEI FPSGIAGLNE
YEKAQRIYNY IEKNISYSSV SFRQGAYIPQ RASKTLNTRL GDCKDLSALF VSFARKAGMD
ANLVLVSTRG NGQRSMQLPS MEFNHCVARY KDGANYRTLE LTDNHLPFNA MPQSLAGAQV
LNIPYEYKSG ELIQLYEPTA NFNVIKHRRS KILVDNADLH INTVVTTNGE VASGFRNSYG
EKAQDELKQD LQEAVSGQFR NPVTLEKFAF RNLDNLSDTV TMDETYTVKN DVISVGDLSM
LKPPLLDIVA TVDIFNNEAR QYPFEYWKYE NVDSYNTEVE IELPAGKAFD QVPSDVQASF
GNMKYELTYI KPAPNKLLIK RVFQTNIRDN IQPEAFPKMK EFFNLIVAAE QKYVSFK
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