Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1178 |
Symbol | |
ID | 8357294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1399995 |
End bp | 1401236 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644963334 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_003120877 |
Protein GI | 256420224 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCCT ACATTTGTAA TAACCAGAAT CTCCTCATTA TGAAAGGAAG AGTTAGTCAG GTGCTTATAC ATATTACCGG TTGCGTGATC TTTCTGGCAC TACCAATCGT ATTCTCACCG GATGCCAGCA ATCTGTCAGA CCTGTGGAGA TACCCACCTG CCCTGAAAGA TTTCCTGGTA TACCTGGTCA TCCTGCTGTT CTTCTATTTC AACTATTTCG TCCTGATCCC ACAGTATTAC TTCCGTCGGA AATATCTGGC ATTCTTCCTC ATTTCGCTGA TCTGTTTCAC AATCATTGTA CTCTTACCCA ATATGTTGGT GGACTTCAGA GGCGGTCCTC CGCGGGAAGG TTACGAGTGG CCCGCCAATA ATCCCATGCC GATGCCTTCT GACAGGCATC CACACGAAAT GCAGCACTCT CCGATGGAAC AGGCAGACGA AATGAGCCGT CAAGGGAACG ATCATCCATC GCTTCCGGAC AGGTCTTTTT CTCCTCAACC TCCTCCTGGT ATGGGCCCAG GCGCCCTGCC ACAGTATAAT CACCATCCGG TATCCCGTTC TATTTTACTG GATATCGGAC ACCAGGTATT CCTGTTTCTG GCGGTATTCT TTTTTTCCCT GATACTCCGC ATTACGGACC GATGGCGACA AACAGAAAAA GAAAAACTCA ATGCAGAGTT ATCTTATCTG AAAGCACAGA TCAATCCACA TTTTCTGTTC AATATCCTGA ATACAATCTA TTCGCTGGCT GTTGAAAAAT CAGATCAGAC AGGAACAGCT GTCGTCAAAC TATCACAAAT GATGCGTTAT GTGATCAGCG ACGCCGGGCA CCAACTGGTG CCGCTATCCA GAGAAATCGA CTATCTGCGT AATTATATCG AATTACAGAA AATGCGTTTC GGCGATCAGC TTCCCCTGTC CTTTACAGTA ACAGGACAGG CTACCGGCCA ACTGATTGCG CCGTTGATAC TGATCTCGTT CGTTGAAAAT GCATTCAAAC ATGGCGTCAA CGCAGCTGAA AATACCGACA TTAAAATAAC TGTGAACATA CTGGAAAATC GACTTCATTT TTCTGCATTT AATAACAAGG TGACCATAAA GGAATTGCCG GAAACAGAAG GTGGTATAGG TCTGGAAAAC ACGTGCAAAC GCCTGCAACT GCTATATCCT GCCAGCCATA CGCTGGTGAT CAAAGATGAA GCAACTTATT TTGAAGTATC TCTCTCATTA CAATTATCAT GA
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Protein sequence | MIAYICNNQN LLIMKGRVSQ VLIHITGCVI FLALPIVFSP DASNLSDLWR YPPALKDFLV YLVILLFFYF NYFVLIPQYY FRRKYLAFFL ISLICFTIIV LLPNMLVDFR GGPPREGYEW PANNPMPMPS DRHPHEMQHS PMEQADEMSR QGNDHPSLPD RSFSPQPPPG MGPGALPQYN HHPVSRSILL DIGHQVFLFL AVFFFSLILR ITDRWRQTEK EKLNAELSYL KAQINPHFLF NILNTIYSLA VEKSDQTGTA VVKLSQMMRY VISDAGHQLV PLSREIDYLR NYIELQKMRF GDQLPLSFTV TGQATGQLIA PLILISFVEN AFKHGVNAAE NTDIKITVNI LENRLHFSAF NNKVTIKELP ETEGGIGLEN TCKRLQLLYP ASHTLVIKDE ATYFEVSLSL QLS
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