Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0974 |
Symbol | |
ID | 8357088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1172472 |
End bp | 1173860 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644963128 |
Product | RagB/SusD domain protein |
Protein accession | YP_003120673 |
Protein GI | 256420020 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATGGT GGAAAATAGG TATTTTTTTC ATGACTACTT TGCTTTTCAT GGCATGTAAA AAAGGATTTC TTGATGTGCC TGATAAAACG GTGCTATTAA AGGAAGCATA CGTGAAAGAT CTTACCACGT TGGATGATTA TTTAAATGGT GTTTATGTAG GGATGGCAGC AGAATTTTAT GAGGGCCAAT ATGCAGTATA TCCTGATTTG GTATCTGATA ACGTGAAAAC AACTGTCGGA GGATTCTTAT CAGCACATTA CATGTGGCAG CAGAATGTGC AGACCGCAAA TTTAGACGTT TTATGGCAGA CAGGTTATCG TCTGGTCCGA GAATGCAGCT TTGTTATTGA AAAGTCTAAT GAGTTCAGAG AGGAAGATGG CTTAAAGGCG AACAGGATAA AAGGCCAGGC ATTGGCATTG AGGGCATTGC TACATTCATA TCTAGTAAAT CTTTTTGCGC AGTCTTATAA CTATACAATT GATGGCAGGC ATCCAGGCAT ACCTTATATT ACCACATCAG ATAGAGAAAT AGCTGTTTCC CGCCAAACAG TGAATGAGGT GTACAACTAT CTAGTGTCTG ATCTTCAGGA AGCAATGCAG TTATTGCCTA AGGCTATCGC GTCAAATAAG CGAATGAACT ACTATGCGGC GGAGGCTTTG CTGTCTAGGG TGTATCTTTT TAGACAGATG TATTCCGCAT CTAAGGACAT GGCTTTGGAT GTAATTGAAC ATGTGCCATT AATGTTACAA AACTACCCTG AGAAATCATA TACAGATCAG GAGACAGATG CGTTATTTCA ATTAGTCCCA TCAAATTTTG GAAAAAGCGG TTATTCTACA AGCTTTCTGG GATTGTATTT TGGCTATAAT ATTTATTATC CAACAGATGA TATTGCAGAA CTTTTAAGAA GCAATTATTC GGATAAAAGA AGTAAATGGA TTTCCTTGGA TACGGTATCA AAAAAATGGA TTGTTACGAA ATTTCCTGAG GGTGTTACTG GAGACGCGTA TGGCCCGATA GGAGATTATT ATTTGACGCT GTTTAAAAGT TCTGAAATGT ATTTAAACGC AGCTGAATCT TATTTTAATC TTAACAAAGA AGACAGTGCA GGGTTTTATA TAAATCGTAT CAGAAAAAGG GCGGGGATTG ACGAGACTTC AGTAACTGGT TCTAATTTAA GAGACTCAAT ATATCAGGAA CGACGCAAAG AATTGGCATT TGATGGTATG AGAATGTTTG ATCTTTTACG TTGGAAGAAA GGAGTATATA GAAAAGATGC GCTGAGCGCA AATGTGAGGG AATTATCGTA TCCAAATGAG AAAGCTATTG CGCCTATACC TAAGCCAGAT GTAGATCTAT CTCACCTGAA ACAAAATGAA GGCTATTAA
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Protein sequence | MKWWKIGIFF MTTLLFMACK KGFLDVPDKT VLLKEAYVKD LTTLDDYLNG VYVGMAAEFY EGQYAVYPDL VSDNVKTTVG GFLSAHYMWQ QNVQTANLDV LWQTGYRLVR ECSFVIEKSN EFREEDGLKA NRIKGQALAL RALLHSYLVN LFAQSYNYTI DGRHPGIPYI TTSDREIAVS RQTVNEVYNY LVSDLQEAMQ LLPKAIASNK RMNYYAAEAL LSRVYLFRQM YSASKDMALD VIEHVPLMLQ NYPEKSYTDQ ETDALFQLVP SNFGKSGYST SFLGLYFGYN IYYPTDDIAE LLRSNYSDKR SKWISLDTVS KKWIVTKFPE GVTGDAYGPI GDYYLTLFKS SEMYLNAAES YFNLNKEDSA GFYINRIRKR AGIDETSVTG SNLRDSIYQE RRKELAFDGM RMFDLLRWKK GVYRKDALSA NVRELSYPNE KAIAPIPKPD VDLSHLKQNE GY
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