| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0967 |
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| Symbol | |
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| ID | 8357081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1160348 |
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| End bp | 1163629 |
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| Gene Length | 3282 bp |
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| Protein Length | 1093 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963121 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003120666 |
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| Protein GI | 256420013 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTACA CACGTCTATG CCTACAATTC CTATCGTTAG GCGTTTTCCT TCTTTTATTT
TCCGTGAGTG TGATGGCCCA GCAGGCTATC AGCGGGAAAG TAATTTCCGG GGACGACAAG
CAGCCATTAC CTGGTGCAAC CATACAGGTA AAAGGTGCAT CTAAAAAGAC CATTACAGAT
AATGCCGGCA ATTTCAGCAT TCAAGCCGGG AACAGTGACA TCCTTATTAT CAGTAGTATC
GGATTTACCA CACAGGAAGT AAGTGCTGCT CAGGCAGCCA ATATCGTGCT TCCTACTGAT
ACCCGTGGAC TGGGTGAGGT AGTGGTAACT GCATTAGGTA TCAAAAAAGA ACGTAAAAAG
TTAGGTTATT CTATACAGGA GGTGAAAGGT GAAGACCTGA CTGTAGCAAG GGAATCTAAC
GTAGTTAATC AGCTGGCTGG TAAAGTAGCT GGTGTAACTG TAATTGGTAG CCCGTCGGGC
GTAGGTGGAT CCGCAAGGGT ATCCATCCGT GGTGAAAGAT CAGTAGATCT TAACAAGAAC
CAGCCATTAT ACGTAGTGGA TGGTGTGCCT ATCAGCAATG CGATCAATGG CGGTTCCGGT
AGCAATAACC TGGAAGTGGA CTTTGGTAAC GGCGCCAGTT TCATCAACCC GGATGATATT
GAGAGCATGA ACGTACTGAA AGGACCTGCT GCTGCGGCCC TGTATGGTTC CCGTGCGGCG
AATGGTGTGG TAATGATCAA AACCAAATCC GGCCGCAAAC AGAAAGGTCT GGGTGTGGAA
GTGAACAGCA ACATCACTCT GGAATCAGCT TTAAAACTGC CTGAATACCA GAAAACGTAT
GGTCAGGGTA ACGCCAGCGG CGGTGATTTC GCCTTTGTAA ACGGTGGCGG CGCTGGTTTA
TCAGATGGAA CAGATGAAGG CTGGGGTCCT GCTTTCCGTG GACAACTGTT CCCGCAGTTC
AATTCCCCTC GTACCCTGAA TGGCCAGGCT ATCCCTTATA CAGGCGGTGA CATGAATGCA
CCGGCAGGTA GCGTGATCAC ACCAAGCACC TGGGAGGCTG ACAATGATAA CCTGAAGAAT
TTCTTAGAGA CAGGCAGAAC TTTCACCAAT AACGTAGCCC TGGTAGGCGC TAACGATAAT
GGTGATTTCC GTCTGAGCTA TACAAATCTT AATCAGACCG GTATAGTACC TAATACTGAT
CTGAAAAGAA ATACAACCAG TTTTTCAGCT GGCTACCATT TCACGCCAAA ATTCACCGCA
AAAGCATTCG TAAGCTATAT CAAGAGTGAA AGTGACAACC GTCCTTCTAT CAGTTATGGT
ACTGAGAGCA TCATGTACCT GTTTAACTGC TGGTTGCCGG CTTCAGTGAG AGTAAGCGAT
CTGAAGCGTC TGTGGCAGCG TGGTCTGGAC AACAGACAAC AGTATAACTG GAACTACAAC
TACCATGACA ACCCATATCT GACCGTATAT CAGAATACGA ATGGTCAGTA TTATGATCGT
CTGATCGGTA ATGTTGTTTT AAGATATGAT CTCGCCAGCT GGTTGAACCT ACAGGTACGT
ACTGCTACTG ACTGGAGCAA TGAGCGTCGC GAGTATCGCA GGGCTTTCAG TACACAGCGT
TTCCCTTACG GTGAGTACCG TGAAGTGAAC ATTGTAAATG AAGAGCGTAA CACAGATTTC
CTGTTCGCAG CAGATAAAGA GATCAATTCT AATTTCTCTT TCAATGCGAC CCTGGGTGGT
AACCAGATGC GTCAGACTTC CCGTTTCAAC GAGGATATTG CTGGTCAGCT GAACATTCCT
AATGTATATC GTCTGACAAA CTCCCGCATT GCGCTGGTAT CTAACCAGAA TAATGTTGGT
AAGCGTATCA ACAGTTTCTA CGGATCAGCA GGAGTTTCTT ATAAGAACAA GCTGTTCCTG
GATGTAACCG GTCGTAATGA CTGGAGTAGT GCACTCACAC TGCCGGAAGA TCTGAAAGCT
TTCGGACAGG AGCAGAATTC TTATTTCTAT TCTTCCGTAG CCCTGAGTGC TATTATCAGC
GATATGGTGA AACTGCCATC TGTGATCAGT TTTGCGAAAC TGAGAGGAAG CTTTGCACAG
GTAGGTAATG ATACCGATCC ATTTGCCTTT ACACAGACCT TTAATCGTAG CGATCCGTTT
GGCGCTTCTC AGATCTATGG CGAAACCAGC CGTTTATCTA ACCTGAATCT GAAACCGGAA
ATCAGCAATG CCTTTGAATT TGGTGCTGAC ATCCGTTTCT GGCAGAATAG GGTAGGACTG
GACCTGACTT ATTACCAGAG TAATACAAAG AACCAGATCC TGAACATTCC TTTATCTAAC
ACCAGTGGTT ATGAAAGTCG TGTGATCAAT GCAGGTTCTA TCCGTAATCA TGGTTTTGAG
GTTATGCTGA ATGTGACGCC GATCAAGACT AAATCTTTCA ACTGGGATGC TTACGTGAAC
TTCTCTACTA ACCGCAGTAA GGTACTGGAG CTGACTGACG GTCTGACCAA CTATGTAATG
GCTGACAGAA ACGTATCAGT AGAAGCGAGA GTAGGAGAGC GTATGGGTGA CCTGTATGGT
ATTGGCTTCG CACGCGTACA GAACACAGAT GCGAATGCAC CTTACTATGA TGCAAGCGGT
CAGTATACCG GTCAGATGGT ATTCGCAGCG AATGGGCGTC CGGTGGCTAC TACCGAAAGA
ATCAGACTGG GTAACTATAA CCCTGACTGG CTGATGGGTA TCGGCAATAC ATTTACTTAT
AAAGGTGTAC GTCTGAGCTG TCTGTTTGAT GTGCGTCATG GCGGTAAACT CTATTCATTG
ACACAGACCG TAGGTCGTGA AGGCGGTATC ATCAAAGAGA CCCTGGAAGG ACGTGCAGAT
GGTTATGATA TGAGCAAAGC AGGCAATGGC GTGATCGGAT CGGGTGTGGT ACAGGCGGCA
GATGGTAAGT TCAGTCCTAA CACCACGAAG GTAGCGGTAC GCGAGTGGCA CAGTGCCTGG
ACTGGTGGTC GTAACATCGC TGAGGGAGTA ATGTATGATG CGTCATTTGT AAAACTGCGT
GAACTGCAGA TCGGTTATTC CTTCCCCGGA TCATTTAAAA AGGGGGTGAT CAAAGGTATG
AACGTATCAC TGGTAGGCCG TAACCTCTTC CTGTGGGATA ATGTACCACA CGTAGATCCA
GAGGTGATGT CTTATTCCGG CGGTACAGCC CTGCCTGGTA TTGAGTATAT GAGCCTGCCA
AGCAGCCGTA GCTACGGTGT GAACCTGAGT TTTAAATTAT GA
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| Protein sequence | MRYTRLCLQF LSLGVFLLLF SVSVMAQQAI SGKVISGDDK QPLPGATIQV KGASKKTITD
NAGNFSIQAG NSDILIISSI GFTTQEVSAA QAANIVLPTD TRGLGEVVVT ALGIKKERKK
LGYSIQEVKG EDLTVARESN VVNQLAGKVA GVTVIGSPSG VGGSARVSIR GERSVDLNKN
QPLYVVDGVP ISNAINGGSG SNNLEVDFGN GASFINPDDI ESMNVLKGPA AAALYGSRAA
NGVVMIKTKS GRKQKGLGVE VNSNITLESA LKLPEYQKTY GQGNASGGDF AFVNGGGAGL
SDGTDEGWGP AFRGQLFPQF NSPRTLNGQA IPYTGGDMNA PAGSVITPST WEADNDNLKN
FLETGRTFTN NVALVGANDN GDFRLSYTNL NQTGIVPNTD LKRNTTSFSA GYHFTPKFTA
KAFVSYIKSE SDNRPSISYG TESIMYLFNC WLPASVRVSD LKRLWQRGLD NRQQYNWNYN
YHDNPYLTVY QNTNGQYYDR LIGNVVLRYD LASWLNLQVR TATDWSNERR EYRRAFSTQR
FPYGEYREVN IVNEERNTDF LFAADKEINS NFSFNATLGG NQMRQTSRFN EDIAGQLNIP
NVYRLTNSRI ALVSNQNNVG KRINSFYGSA GVSYKNKLFL DVTGRNDWSS ALTLPEDLKA
FGQEQNSYFY SSVALSAIIS DMVKLPSVIS FAKLRGSFAQ VGNDTDPFAF TQTFNRSDPF
GASQIYGETS RLSNLNLKPE ISNAFEFGAD IRFWQNRVGL DLTYYQSNTK NQILNIPLSN
TSGYESRVIN AGSIRNHGFE VMLNVTPIKT KSFNWDAYVN FSTNRSKVLE LTDGLTNYVM
ADRNVSVEAR VGERMGDLYG IGFARVQNTD ANAPYYDASG QYTGQMVFAA NGRPVATTER
IRLGNYNPDW LMGIGNTFTY KGVRLSCLFD VRHGGKLYSL TQTVGREGGI IKETLEGRAD
GYDMSKAGNG VIGSGVVQAA DGKFSPNTTK VAVREWHSAW TGGRNIAEGV MYDASFVKLR
ELQIGYSFPG SFKKGVIKGM NVSLVGRNLF LWDNVPHVDP EVMSYSGGTA LPGIEYMSLP
SSRSYGVNLS FKL
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