Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0851 |
Symbol | |
ID | 8356965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1020402 |
End bp | 1021064 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644963005 |
Product | Ribonuclease H |
Protein accession | YP_003120550 |
Protein GI | 256419897 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTACGTT CATATCACCA AAAAGATATC GCTTTTGAAG CCGGCTGCGA CGAAGCCGGA CGGGGTTGCC TTGCGGGGCC GGTATTCGCA GCAGCTGTGA TTTTACCGCC TAAATTCAGG AATAAACTCC TGAATGATTC AAAGCAGTTA AAGGCTTCCG ACCGCGATAA GTTGCGTGAA GTAGTGGAAA AAGAGGCGAT AGCTTATGCG GTGGCCAGCG TGGATAACCT GGAGATAGAC AGGATCAACA TCCTGAAAGC ATCTTTCAGA GCCATGCACC TGGCATTGGA CCAGCTAAAA CAGCAACCGG GTTATATATT GGTAGATGGA AACAGGTTCG TTCCCTACGG AAAGACTCCC CATGCCTGCA TTGTCAAAGG GGATGGCATA TATGCCTCCA TAGCGGCAGC CTCCATTCTG GCCAAAACCT ACAGGGACGA GTACATGCAC AAGCTGCATC AGGAATATCC GCATTTCGGG TGGTTGGAAA ATAAGGGATA CCCTACATTG TTCCACCGGG ATGCCATCCG CGCACATGGC GAAACGCCTT ATCACCGGAA GACATTCAGA TTATTACCTG ACCAGCCGGA GCTGGATTTC GATGCCCCTG TAGCGGAATA TACAGTTGTG AAAGTGGTTT CCCCGGAGGA AACCCAGGAT TAG
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Protein sequence | MLRSYHQKDI AFEAGCDEAG RGCLAGPVFA AAVILPPKFR NKLLNDSKQL KASDRDKLRE VVEKEAIAYA VASVDNLEID RINILKASFR AMHLALDQLK QQPGYILVDG NRFVPYGKTP HACIVKGDGI YASIAAASIL AKTYRDEYMH KLHQEYPHFG WLENKGYPTL FHRDAIRAHG ETPYHRKTFR LLPDQPELDF DAPVAEYTVV KVVSPEETQD
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