| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0778 |
|---|
| Symbol | |
|---|
| ID | 8356891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 944192 |
|---|
| End bp | 945334 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644962931 |
|---|
| Product | aminotransferase class I and II |
|---|
| Protein accession | YP_003120477 |
|---|
| Protein GI | 256419824 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTATTTTA TGTCAAAACT ACCCAACGTA GGCACCACTA TATTCTCAGT GATGTCCGCC
CTGGCGGCGC AGCATAAAGC CATTAACCTC TCCCAGGGAT TTCCCGATTT TGATTGTGAT
GAACAGCTGA AAAGAATGGT CAGCGAAGCG ATGCAGGAAG GGCATAACCA ATATGCACCC
ATGCCTGGTA TTATGCCTTT GCGTGAAGTG ATTGCTAAAA AAATACAAAA TCTGTATGGC
CAGCAGGTAA ATCCGGATAC GGAAATCACC ATCACACCTG GTGGTACATA TGCCATCTTT
ACAGCGATCG CCACCTGTAT CAGCCCCGGT GATGAAGTTA TTATCTTCGA ACCGGCATAT
GACAGTTATA TTCCGAATGT ACTGGTCAAT GGCGGTGTAC CCGTACTGAT TCCGCTTTCT
TATCCTGATT ATACAATAGA CTGGTCGCTG GTACGCAGTA AGATTACACC GCGTACTAAA
ATGATCATGA TCAATACGCC GCATAATCCC ACCGCCAGTA TTATGACGGC CGCTGATATC
GCGCAACTAC AGGAAATAGT AAAGGAGCAT AACTTACTCG TATTATCCGA TGAAGTATAT
GAGCACCTGG TTTTCGATGG TGCACAACAT CTCAGCATAC TCCGTTATCC GGAGTTATTG
AAAAACAGTT TTGTCACCTT TTCTTTTGGT AAGGTGTTTC ACAACACCGG TTGGAAAATG
GGCTATTGCG TAGCGCCGGC TCACCTGATG GCAGAATACC GTAAAGTGCA TCAGTATCTC
TGTTTTTCGG TGAATACCCC GATGCAGTAT GGCCTGTCCC GCTATTTACA GACGCCGGAA
CATTATCTGA GTCTGCCGGT ATTTTATCAG CAGAAGAGAG ATTATTTCCT GGAACTGACA
AAAGATACCC GTTTCACGCC GCTGTCTTCA AAAGGCAGTT ATTTTCAGCT AATGCGTTAC
GATCGTATTT CAGATGAAGG GGATAAGGAG TTTGCCACCC GTATTACCAA AGAATTTGGG
GTCGCCTGCA TTCCTGTTTC AGCTTTTTAC GAAAACGGAA AAGATGATCA TGTGGTAAGG
TTCTGTTTCG CGAAAAAAAC GGAAACACTG GAACAGGCAG CGGAAAGACT CCGAAAAATC
TGA
|
|---|
| Protein sequence | MYFMSKLPNV GTTIFSVMSA LAAQHKAINL SQGFPDFDCD EQLKRMVSEA MQEGHNQYAP
MPGIMPLREV IAKKIQNLYG QQVNPDTEIT ITPGGTYAIF TAIATCISPG DEVIIFEPAY
DSYIPNVLVN GGVPVLIPLS YPDYTIDWSL VRSKITPRTK MIMINTPHNP TASIMTAADI
AQLQEIVKEH NLLVLSDEVY EHLVFDGAQH LSILRYPELL KNSFVTFSFG KVFHNTGWKM
GYCVAPAHLM AEYRKVHQYL CFSVNTPMQY GLSRYLQTPE HYLSLPVFYQ QKRDYFLELT
KDTRFTPLSS KGSYFQLMRY DRISDEGDKE FATRITKEFG VACIPVSAFY ENGKDDHVVR
FCFAKKTETL EQAAERLRKI
|
|---|
| |