| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0703 |
|---|
| Symbol | |
|---|
| ID | 8356815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 846089 |
|---|
| End bp | 847018 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644962855 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003120402 |
|---|
| Protein GI | 256419749 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCATCG TGAGAAAGTA CCTTTTTGCC ATACTCGTAT GCCTGCCGGT ATTCCTCTTT
GCACAGGTAC CGGCCATTCA GAAACCAACT GCAACGGTCC CGTTCCGGCT GTTCGACCGT
TACATGGTGA TTAGCTGCGC CCTTTCAGGC GTAACGCCTA CCGGTGTTGT AGACAGTCTG
CACTTCATTT TTGATACCGG GGCAGAAGTA ACTACCCTGC GGCAACAGAC AGCCGACCGG
CTGCAACTGA AAACGAAAAA CAACGGTGGA CTCAGTGGTA CAGATGCCGT TGTGGTCAGA
GTACCGACCG CAGAGCTCAG CGTCCTGTTT TTTGAAAAGA CCAGGCTTCC TTTCGTCAAA
GTATATATCG AACCCCTCAC CGAATTCAAT GATATTCCCG TCACTATCGA CGGTATTATT
GGCGTAGACC TGCTCAAGGC ATTCATCGTG AAGATCGATT ATGAGAAAGA AGTTTTAGAG
CTTTACCGTG CACAAAAGAC ACCGCCTAAT ACACCCGGAC AAAGAATGAC ACTCACCAGG
AACTTTGAAA CGCCGGCACT GGAAGGCACA ATTACCCTGC CCGACGGTCA GACGCTCAAC
AGTTACTATC ATCTCGTTTC AGGCGGAGAA TACGGTATCC TTTTTAACTT CCCTTATGTG
GAAAAACATC ACTTAAATAC CCGTCTGCCC ATCCTGAGCA CCGATAAAGT AGGTGATCTG
TATAAAGATT TAACCTACAC CAATACCAGT TTGCCCGCCC TTGAACTGGG CAGCACAAAG
CTGACACAGG TTGGAGCCAG CTATAGCAAA GATGTGAATG ATGCCGGCTC TATCCGCGAA
ATGGCCGGCT CTATTGGTTA TATGGTATGG CGCCAGTTCA AATCCATTAC GATTAATTAT
ACCGGACGCG AGTTATTCCT GGAAAAATAG
|
|---|
| Protein sequence | MFIVRKYLFA ILVCLPVFLF AQVPAIQKPT ATVPFRLFDR YMVISCALSG VTPTGVVDSL
HFIFDTGAEV TTLRQQTADR LQLKTKNNGG LSGTDAVVVR VPTAELSVLF FEKTRLPFVK
VYIEPLTEFN DIPVTIDGII GVDLLKAFIV KIDYEKEVLE LYRAQKTPPN TPGQRMTLTR
NFETPALEGT ITLPDGQTLN SYYHLVSGGE YGILFNFPYV EKHHLNTRLP ILSTDKVGDL
YKDLTYTNTS LPALELGSTK LTQVGASYSK DVNDAGSIRE MAGSIGYMVW RQFKSITINY
TGRELFLEK
|
|---|
| |