| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0608 |
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| Symbol | |
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| ID | 8356719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 743678 |
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| End bp | 746857 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644962759 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_003120307 |
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| Protein GI | 256419654 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0300308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.48397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCA CAGAAGTATC CATAAAGCGA CCCACAATAG TGGTGGTAGT CTTTACCATC
CTGACGCTGC TGGGTGTGAT GAGCTATAAG TCACTCAACT ATGAGCTGCT GCCGAAGTTT
ACTTCGCCGG TAGTAACCAT TGCCACCGTA TATCCCGGTG CTTCCCCTAA AGAGGTGGAA
AGTACCATCA CCAAAAAGAT TGAGGATGCG GTAGCATCAA TGGAGAAGAT CAAAAAAATC
ATCTCCAAAT CTTCAGAGAG TTTATCTACC GTAACGGTTG AATTGAATAA CGATGCGAAC
GTAGACATTG CCCTGCAGGA TGCACAGCGT AAAGTGAACG CAATCCTCTC AGACCTGCCT
ACTGATGCAA AAGCGCCTTC GCTGAACAAA TTCTCCCTGG ATGACTTACC GATCATGACA
CTGTCCGCCA CTGCCAGTAT GGACAGCAAG CAGTTCTATG ACCTGATCGA TAAAAAATTG
CAACCACTCT TATCCCGTTT ACCGGGTGTG GCCCAGATCT CCCTGATCGG TGGTCAGGAG
CGTGAGATCC AGGTGAACAT CGATCCTAAG AAACTGGAAG CATATAAACT GTCCATCCTG
CAGGTAAGAC AGCTCATTAC CAATGCGAAT CTGGACTTCC CCACCGGTAA GGTGAAAACC
CAGGATCAGC AGATACTGGT ACGTCTGGCT GGTAAGTATA AAGACGTGGA TCAGCTGCGT
AACCTGGTAC TGGCTACTAC AGCTACCGGT ACCCAGATCC GTCTGAAAGA TGTAGCGGAT
GTACAGGATG CACAGAAAGA TGTGGATCGT CTGGCCCGTG TGGATGGTAC CAGCTCCATT
GCATTGATGG TACAGAAACA GAATGATGCG AATGCGGTAA CCGTGAGTGA GGAAATGAAG
AAAGCCATCG CATCTATCGA AAAAGACTAT GTTTCCGCTA ACCTGAAGAT ATTTATTGCA
AACGATTCGT CTGACTTTAC GCTGGAATCA GCTGATTCCG TGATACATGA CCTGATCATT
GCGATTGTGC TGGTGGCTGC CGTGATGCTG TTGTTCCTGC ACAGTATCCG TAGTGCGATC
TTCGTAATGA TCTCAATCCC GGCTTCCCTG GTAGCTACAT TCATCGGTAT GAAGCTATTC
GGCTTCTCCC TCAACCTGAT GTCCTTACTG GGGCTGTCAC TGGTCGTAGG TATCCTGGTG
GATGATGCAA TCGTGGTACT GGAGAATATT TACCGTCACA TGGAAATGGG TAAGAACAGA
GTACGTGCGG CATTTGATGG AGTGAAAGAG ATCGGATTTA CCGTAACCTC TATTACCCTG
GTAATCGTGG TGGTGTTCCT GCCTATCTCA CTGACCAATG AACTTGTATC AAAGATCCTG
CGTGAATTCT GTGTGGTGGT GATGATATCA ACCATGCTTA GTTTGCTGTC TTCCTTTATG
ATCGTACCGC TGCTTTCCTC CCGTTTTGGA AAGCTGGAAC ATATCACCGG TAAGAATTTC
TTCGAAAAAT TCATTCTCTG GTTTGAGGCA CAGCTGCAGA AATTCACTGA CTGGATGACT
TCTATCCTGA AATGGGCACT GACGCACAAA CGCTATACCC TGATCGTTGC GATCGGTCTG
CTGATACTGT CTTTCATGCT GGTAGGTAAA GGTTATATCG GTGGTGAGTT CATTCCGAAA
GGCGACCGCG GACAGTTCAT TGTTGTACTG GAAATGCCGA AAGATGCATC TGTCGAACAG
ACGAATCAGG CTACCCGTAA AGCGGAAGCA TACCTCTCTA AAAAACCGGA GATCACCCGT
CTGATTACAA CCGTAGGTCA GACCAGTGAG GATGGTTTTG GTGTGTCCCA GTCTACTGCC
TATAAATCAG AAATCACAGT GATGCTGGTA GATGCAGAAG AACGTTTAGA TGGTTCTGAT
ATCTATGCTG CAAAGACAAA AGTTGAGCTG AGAAAACTGC TGCCAGGTGT GAAACTGAAA
ACAATGGACG TGAGTATCCT GGGTACTGCA GAAGCTTCTC CTGTAGAGCT GGTGGTGATG
GGTACTGATA TGGACAGTGT AATGAGTTAT GCGAAATCAG CCATGGGCGT ACTGGCGACT
ATTGATGGTA CCAGTGACGT GAAACTGTCA GTAGAAGAAG GTAACCCGGA AATCAATGTA
CAGGTAGACA GGGATAAGAT GTCTGCACTG GGATTGACGC TGGAAGGTGT GGGTGGAACG
ATGCAAACGG CGTTCAGCGG TACGGCAGAT GATTCCAAAG TGAAATTTCG TCAGGGTGAC
TACGAATATG ATATCAATAT CCGTTTTGAT GATTTCGACC GTAAGAACCT GGATGACGTG
TCCAATATTG AGTTTATCAA CAGCCAGGGA CAACTGATCC GCTTATCACA ATTTGCGACG
ATCACGGAAG GTTCTGGCCC GAGCAGACTG GAAAGAAGGG ATAAGAATAC ATCTATTTCC
GTGAAATCGC TGGTAGTAGG ACGTCCTTCC GGTTCTGTAC AACAGGAATT TGCGCAAAAA
CTGGAGACAT TGCGTAAGCC GGTAGGTATC AGTTACCTGT GGGCAGGTGA TGCGGAAAAC
CAGGGTGATT CCTTTGGAAC ACTGGGTGCA GCACTGCTGA TCTCTATCGT AATGGTATAC
CTGATCATGG TGGCACTGTA TGATAACTAC ATCTATCCTT TCGTGGTATT GTTCTCTATC
CCGCTGGCAA TCATTGGTGC ATTGCTGGCA CTGGCTCTGA CAAATAATAC ACTGAATATC
TTCACCATCC TGGGTATGAT TATGTTGATT GGTCTGGTGG CGAAGAACGC GATCATTCTT
GTGGACTTTA CCAACCAGAT GAAAGAACAG GGACAGAGTA CGATGGAGGC ATTGATCCAT
GCGAACAATG CACGTCTGCG TCCGATCCTG ATGACGACTA TCGCGATGGT GATCGGTATG
TTGCCAATAG CATTGGCTAC CGGTGGTGTG GCTGCGACTA AGAATGGTCT GGCCTGGGTA
ATCATCGGTG GTCTGATCAG TTCCATGTTC CTGACGCTGA TCGTGGTACC GGTAGTGTAC
AAGATTGTGG ATGGTATTAT GGACCGCTTT GGCTGGAACA AGCCATCTGC TAAACGACTG
ATCCGTCAGC GACTTGTAGC GCCATATGCG GCCGAAATTG AAGAAGCTTC ATTGAATTAA
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| Protein sequence | MKITEVSIKR PTIVVVVFTI LTLLGVMSYK SLNYELLPKF TSPVVTIATV YPGASPKEVE
STITKKIEDA VASMEKIKKI ISKSSESLST VTVELNNDAN VDIALQDAQR KVNAILSDLP
TDAKAPSLNK FSLDDLPIMT LSATASMDSK QFYDLIDKKL QPLLSRLPGV AQISLIGGQE
REIQVNIDPK KLEAYKLSIL QVRQLITNAN LDFPTGKVKT QDQQILVRLA GKYKDVDQLR
NLVLATTATG TQIRLKDVAD VQDAQKDVDR LARVDGTSSI ALMVQKQNDA NAVTVSEEMK
KAIASIEKDY VSANLKIFIA NDSSDFTLES ADSVIHDLII AIVLVAAVML LFLHSIRSAI
FVMISIPASL VATFIGMKLF GFSLNLMSLL GLSLVVGILV DDAIVVLENI YRHMEMGKNR
VRAAFDGVKE IGFTVTSITL VIVVVFLPIS LTNELVSKIL REFCVVVMIS TMLSLLSSFM
IVPLLSSRFG KLEHITGKNF FEKFILWFEA QLQKFTDWMT SILKWALTHK RYTLIVAIGL
LILSFMLVGK GYIGGEFIPK GDRGQFIVVL EMPKDASVEQ TNQATRKAEA YLSKKPEITR
LITTVGQTSE DGFGVSQSTA YKSEITVMLV DAEERLDGSD IYAAKTKVEL RKLLPGVKLK
TMDVSILGTA EASPVELVVM GTDMDSVMSY AKSAMGVLAT IDGTSDVKLS VEEGNPEINV
QVDRDKMSAL GLTLEGVGGT MQTAFSGTAD DSKVKFRQGD YEYDINIRFD DFDRKNLDDV
SNIEFINSQG QLIRLSQFAT ITEGSGPSRL ERRDKNTSIS VKSLVVGRPS GSVQQEFAQK
LETLRKPVGI SYLWAGDAEN QGDSFGTLGA ALLISIVMVY LIMVALYDNY IYPFVVLFSI
PLAIIGALLA LALTNNTLNI FTILGMIMLI GLVAKNAIIL VDFTNQMKEQ GQSTMEALIH
ANNARLRPIL MTTIAMVIGM LPIALATGGV AATKNGLAWV IIGGLISSMF LTLIVVPVVY
KIVDGIMDRF GWNKPSAKRL IRQRLVAPYA AEIEEASLN
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