| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0522 |
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| Symbol | |
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| ID | 8356628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 618596 |
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| End bp | 620428 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644962668 |
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| Product | Cytochrome-c oxidase |
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| Protein accession | YP_003120221 |
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| Protein GI | 256419568 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000527837 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACG AAGCAACATT GCACAGTCAG GAGGTAATTC ATGGCGCAGC GCATGCGCAC
GACCACGGTC ACGGGCACGA TGATCATGAG CATCATGAAG GCGGCTTCAT TTCGAAGTAT
GTTTTCAGCC TTGACCACAA AACTATTGCC AAGCAGTTTC TGATTACCGG TATTATCTGG
GCTATCATAG GTGCTTTCTT CTCTGTACTG TTCCGTTTGC AGCTGGGTTT CCCTGATGCT
ACTTTCCCTT GGCTGGAAAG CATCCTGGGT CACTGGGCAA AAGGCGGTCG TATCACCCCG
GAAGCGTATT ATGCATTGGT AACCATGCAC GGTACCATCC TGGTATTCTT CGTATTAACA
GCCGGTTTGA GCGGCACATT CTCTAACCTG CTGATTCCTT TGCAGGTAGG TGCCCGTGAT
ATGGCTTCTC CTCTCATGAA CTGTATGAGT TACTGGGCGT TCTTCCTTGC GAGTGTCGTA
ATGATGGCTT CCCTGTTTGT TCAGACAGGT CCTGCATCTG GTGGCTGGAC TTCTTATCCT
CCGCTGAGTG CACTGGGTGA CGCTTCAATC GGTTCTAAAA TAGGTATGGA CTTATGGCTG
ATCTCTATGG CGCTGTTCGT TGTTTCGCAG CTGCTGGGTG GTCTGAACTA TATCTCTACT
ATCCTGAACA TGCGTACCAA AGGTATGAAC ATGACTAAGA TGCCGCTGAC TATCTGGAGC
TTCTTCTTCA CTGCCGTACT TGGTGTACTT TCCTTCCCTG TATTATTGTC TGGTTTCATC
CTCCTGCTGT TTGATCGTCA CGGAGGTACC AGCTTCTACC TGAGCGATCT GTTCGTTGCC
GGTAAAGCAC TCTCCAACGA AGGTGGTAGT GCTATCCTGT ATCAACACTT GTTCTGGTTC
CTCGGTCACC CTGAGGTATA TATCATCATC CTCCCTGCGA TGGGTATGGT ATCTGAGATC
CTGGCGGTTA ACTCCCGCAA ACCGATCTTC GGTTACCTGG CGATGGTGGG TTCTATGTTT
GCTATCGTTA TCCTGGCGTT CCTGGTATGG GCGCACCACA TGTTCGTTAC TGGTCTGAAT
CCGTTCCTGG GTGCATTCTT CGTACTGTTA ACATTGCTGA TTGCGGTTCC ATCAGCCATC
AAGGTGTTCA ACTGGATCAC GACTATCTGG AGAGGTAACC TGCGCTTTAC GCCTGGTATG
CTGTTCTCTA TCGGTTTCGT GAGCACATTC ATCTCCGGTG GTCTGACAGG TATCTGGTTA
GGTAACTCTT CTATCGATAT TCACCTGCAC GATACATACT TCGTAATTGC GCACTTCCAC
ATCGTAATGG GTGTATCTGC GTTCTTCGGT ACGTTCGCCG GTGTATACCA CTGGTTCCCT
AAAATGTTTG GTCGTTATCT GAACAATACC CTCGCTTACA TTCACTTCTG GGCTACGCTG
ATCGGTGCTT ACCTGATCTT CTGGCCAATG CACTATGAAG GTATCGCGGG TATGCCAAGA
AGATATTATG ATTACACCAG CTGGGAATCA TTCAAACAGT TCGCTGATCT GAACCACTTC
ATCAGTATCG TGGTAATCGC AGTATTTGCT GCTCAGCTGC TGTTCGTATT TAACTTCTTC
TACAGCATCT TCAAGGGTAG AAAGGTAACT ACTACCAACC CATGGAACTC TACTACACTT
GAGTGGACAA CTCCAATCAA TCCTGGTCAC GGTAACTGGC CTGGTGAGAT CCCTGAAGTA
TATCGCTGGC CATATGACTA CAGCAAGAAC GGTAAAGATT TCGTTCCTCA GACTGTACCA
TTGTCTCCAG ACGAAGAAAA AGAAGGACAT TAA
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| Protein sequence | MSNEATLHSQ EVIHGAAHAH DHGHGHDDHE HHEGGFISKY VFSLDHKTIA KQFLITGIIW
AIIGAFFSVL FRLQLGFPDA TFPWLESILG HWAKGGRITP EAYYALVTMH GTILVFFVLT
AGLSGTFSNL LIPLQVGARD MASPLMNCMS YWAFFLASVV MMASLFVQTG PASGGWTSYP
PLSALGDASI GSKIGMDLWL ISMALFVVSQ LLGGLNYIST ILNMRTKGMN MTKMPLTIWS
FFFTAVLGVL SFPVLLSGFI LLLFDRHGGT SFYLSDLFVA GKALSNEGGS AILYQHLFWF
LGHPEVYIII LPAMGMVSEI LAVNSRKPIF GYLAMVGSMF AIVILAFLVW AHHMFVTGLN
PFLGAFFVLL TLLIAVPSAI KVFNWITTIW RGNLRFTPGM LFSIGFVSTF ISGGLTGIWL
GNSSIDIHLH DTYFVIAHFH IVMGVSAFFG TFAGVYHWFP KMFGRYLNNT LAYIHFWATL
IGAYLIFWPM HYEGIAGMPR RYYDYTSWES FKQFADLNHF ISIVVIAVFA AQLLFVFNFF
YSIFKGRKVT TTNPWNSTTL EWTTPINPGH GNWPGEIPEV YRWPYDYSKN GKDFVPQTVP
LSPDEEKEGH
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