| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0517 |
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| Symbol | |
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| ID | 8356623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 615078 |
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| End bp | 615764 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644962663 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_003120216 |
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| Protein GI | 256419563 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.576409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGCAA TATTAGTGCC ATTGGCGGGA TACCTGATTG TAGATCACTA CAGTAAAAAC
GTGGTTCCTA TCCCACGGTA CTACATCCCG GAAGGAGTAG ATACTATAGT GAAAAACGGC
ACAACTACTT ACGATACTAC CTTCCATGTA GTGAAAGATA TCACCCTCAC TAACCAGATG
GGGCGCCAGG TAAGTCTGAA AGACCTTCCT AACAAGGTAA TACTGGTTAA TTTCTTCTTC
ACCTCCTGCC CCAGCATATG TCCGCGTATG ATGGCCAACC TTGAAAAGAT CCAGCAGGCT
TACATCAAGA ACGATACCCT CTTACAGCTG GTATCACTGA CTGTGGATCC GGAGAGAGAT
TCTTCTGAAA CGCTGCGTAT GTATGGTGTA AAACATGGTA TCAATCCGGA TAACTGGTGG
TTACTCACCG GCGCCAAGAA AGATATTTAT GACTGGGCGA GAAATGAAGT ATATGTGAGT
GTGGTAAAAG GAGACGGCGG ACCGGATGAT TTTATCCATA CCGAGAAACT GGTGCTGCTG
GATAAGAATC ATAATATCAG AGGTTATTAC GATGGAACGG ATTCCAATGC CGTACGTAAA
TGTGCCAATG ATATTGCCGT GCTGCACCTG GAGAAGGATA AACACAGACC GGGTTTGTTA
AAAAGACTGT TTTCAACAAC GGAATAA
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| Protein sequence | MLAILVPLAG YLIVDHYSKN VVPIPRYYIP EGVDTIVKNG TTTYDTTFHV VKDITLTNQM
GRQVSLKDLP NKVILVNFFF TSCPSICPRM MANLEKIQQA YIKNDTLLQL VSLTVDPERD
SSETLRMYGV KHGINPDNWW LLTGAKKDIY DWARNEVYVS VVKGDGGPDD FIHTEKLVLL
DKNHNIRGYY DGTDSNAVRK CANDIAVLHL EKDKHRPGLL KRLFSTTE
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