Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0469 |
Symbol | |
ID | 8356575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 565057 |
End bp | 566589 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644962615 |
Product | 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family |
Protein accession | YP_003120168 |
Protein GI | 256419515 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGGAC GGCCTTATCT GCTACTGATC TTTTTTCTCC TTTTCAAACT GACTTTTAAC TATTGGGCTA TATATGCCGG TTATGACCTG CATAGAGATG AATACCTTCA CCTGGACCAG GCCAATCATC TGGCAGCAGG CTATCTTTCA GTGCCACCGT TTACGGCATT TATTTCACTG CTCATAAAAG CGCTTGGCGG CGGTATGCAT TGGGTGCGCT TCTTCCCTGC CCTGTTTGGC GCATTGACCA TGTTGCTGAT CTGGAAGACT GTCGAATTAC TGAAGGGTGG ATGGTATGCA CAACTGATCG CAGGACTGCT GTTTCTGTGT TCTGCCTTGT CGAGAATCAA TACCCTGTTT CAGCCAAATA GTGCAGATAT CCTGGCCTGG ACGCTGATGC TTTACCTGTT GATACGTTAC GTAAAAGAGG GGAATTCCAG GCTGCTATTG TGGCTTGGAT TGACTACAGG TATCGCCTTC CTGAATAAAT ACAATGTACT ATTCCTGGTA GCCGGTTTGC TACCTGCATT GTTGATCTCT TCACAACGAA AAATATTCCT TGATAAATAC CTGTATGGCG GTCTGCTGAT TGCTTGTCTG CTGGCATCGC CCAATGTAAT CTGGCAGCTA CAAAACGGTA TGCCGGTGAT ACATCATATG CATGAACTGG CAGAGACGCA ACTGGTGAAT GTAGAACGGA TGGGTTTTGT GAAAGACCAG TTGGGCATTT TCCTGATAGG TAGCCTGATC TGGATAACAG CATTGCTATC GCTGATCTGG TATGCTCCTT TCCGCCCTTA TCGTTTTATT GGCTGGACTT TTCTGCTGGT AATGGCGCTG TTCATCTACC TGAAGGCGAA AGGATATTAT GCGTACGGGA TCTATCCCAT ATTACTGGCG CTTGGAGGTG TCTATTGGGA GCGGCTTTTT TCAAAAGGAT GGTTACGATA TCTGCGGCCG GTATGGGCTT TTCTGATCAT ATTTCCTACT GTGTGGTTAT TCCGGCTGAT ATTTCCTGTA CTGTCCCCAC AGCAGTTATA TGCCGCTATG ACGCCGCTGA GACGCGAAAT ATTCTGCAGA TGGGAGGATG GTAAATTGCA TGATCTGCCA CAGGATTTTG CTGATATGCG GGGTTGGCGG GAACTGGCTG ATCTGGCAGT GAAGACTTAT CAGCAGGTAC CTGACAGCGA ACGGAAAAAT ACCCTGATAC TCTGCGACAA CTACGGACAG GCAGGCGCTA TTAACTACTA TGCAGGAAAG GCGCTTCGTC CGGCGATCAC CTTTAGTGCC GATTATGTAT GCTGGTTTCC AAAAATGGAC AGTCTGCACT ACCTGATCGT AGTGGGAGAA GCGCCGATGG AATATGTCCG GAAATATGCG TCCGGAGACG TCAAAACCGG ACAGATCAAT GACGTTCTGG CAAGAGAATA TGGCACCGGG GTATACCTGT TGCAGGGAAT ATCACCTGTT TTTCCTGCGA AATTGTTTGA ATGGCAACGG CAGGAACAAG CCAGTTTCAG GGCTTGGAAA TAA
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Protein sequence | MSGRPYLLLI FFLLFKLTFN YWAIYAGYDL HRDEYLHLDQ ANHLAAGYLS VPPFTAFISL LIKALGGGMH WVRFFPALFG ALTMLLIWKT VELLKGGWYA QLIAGLLFLC SALSRINTLF QPNSADILAW TLMLYLLIRY VKEGNSRLLL WLGLTTGIAF LNKYNVLFLV AGLLPALLIS SQRKIFLDKY LYGGLLIACL LASPNVIWQL QNGMPVIHHM HELAETQLVN VERMGFVKDQ LGIFLIGSLI WITALLSLIW YAPFRPYRFI GWTFLLVMAL FIYLKAKGYY AYGIYPILLA LGGVYWERLF SKGWLRYLRP VWAFLIIFPT VWLFRLIFPV LSPQQLYAAM TPLRREIFCR WEDGKLHDLP QDFADMRGWR ELADLAVKTY QQVPDSERKN TLILCDNYGQ AGAINYYAGK ALRPAITFSA DYVCWFPKMD SLHYLIVVGE APMEYVRKYA SGDVKTGQIN DVLAREYGTG VYLLQGISPV FPAKLFEWQR QEQASFRAWK
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