Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0389 |
Symbol | |
ID | 8356495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 464475 |
End bp | 465038 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644962536 |
Product | ribosome recycling factor |
Protein accession | YP_003120089 |
Protein GI | 256419436 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0233] Ribosome recycling factor |
TIGRFAM ID | [TIGR00496] ribosome recycling factor |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0303033 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGATG ATCTAACGTT AATAATAGAA GATGCCACCG CAACCATGCG TAAGGCTATC GGACACCTGG AATCGGAACT TACCAAGATC AGGGCCGGTA AAGCCAATCC GCAGATACTG GACGGAATTA CGGTAGACTA CTATGGTTCG CCTACTCCCC TCGCGCAGGT AGCTAATATC ACTGTGGCAG ATGCCCGTAC ACTGACAGTT CAGCCATGGG AAAAAAATAT GCTCCAGCCT ATTGAAAGGG CTATCATCGC CTCTAACATC GGTATTAACC CACAGAACGA CGGTATCATC ATCCGTATGT TCCTGCCGCC ACTGACAGAA GAGAGAAGAA AGGAATTTGT TAAACGTGCA TTGAATGAAG GTGAGCAGGC AAAAATAGCT ATCAGAAATA TCCGCAGAGA TGCGATCGAA GGCATCAAGA AACTGCAGAA AGATGGTCTG AGCGAAGATA CCGCAAAAGA CGCCGAAGCA GATGTACAGA ACCTGACCAA CAAATATATT GAACTGGTAG ATAAACACAC CGCTCAGAAA GAGAAGGAAA TCATGGTTAT CTAA
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Protein sequence | MQDDLTLIIE DATATMRKAI GHLESELTKI RAGKANPQIL DGITVDYYGS PTPLAQVANI TVADARTLTV QPWEKNMLQP IERAIIASNI GINPQNDGII IRMFLPPLTE ERRKEFVKRA LNEGEQAKIA IRNIRRDAIE GIKKLQKDGL SEDTAKDAEA DVQNLTNKYI ELVDKHTAQK EKEIMVI
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