| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0351 |
|---|
| Symbol | |
|---|
| ID | 8356456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 417212 |
|---|
| End bp | 417871 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644962497 |
|---|
| Product | YceI family protein |
|---|
| Protein accession | YP_003120051 |
|---|
| Protein GI | 256419398 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2353] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTT TTCAACACGC TGCATCTTTC GCTTCGATAG GCGTGATCGC TGTGATCACC
GCTTTCACCG TGCAGGTTCA AACTACAGCT CCTATACCTG CAACTGTAAC AACTGTTGCT
GCTACCAGTA AAGTCACGGC TTTCCAGGTA GATAATAAAA GCAGTAAACT CTTATGGACA
GCCCGTAAGG TAACCGGAGA GCATACCGGT ACTATCAATA TCAGCAATGG TACGCTGAAT
GTTGAAAACA ATGCGCTGCA AAGCGGCAGT TTTAAACTCG ATACCCGCAG CATTGCCGTA
ACTGATATTA AAGATGCGGA TGGTAACGCA AAGCTGACCG GCCATCTGAA GAGCGACGAT
TTCTTTGCTG TGGAGAAATT CCCGGCGGCT GATTTTGCTA TCACAGGTAT TAAGCCGCAT
GGCAACAACC TGTACGACGT CACCGGCAAA CTGACTATTA AAGGTATTAC CAACGACATC
AGCTTCCCTG CCACCGTGGT GATCGATAAA GGTAAGCTGA CCGCCAATGC AAAGATAAAA
GTGGACAGAA CGAAGTACGA TATCAAATTC CGTTCTAAAA ACTACTTTGA AAACCTGGGC
GATAAGGCTA TCTACGATGA CTTCGATCTG GATATAACAC TGCTCGCTAA TGCTCAGTAA
|
|---|
| Protein sequence | MKLFQHAASF ASIGVIAVIT AFTVQVQTTA PIPATVTTVA ATSKVTAFQV DNKSSKLLWT
ARKVTGEHTG TINISNGTLN VENNALQSGS FKLDTRSIAV TDIKDADGNA KLTGHLKSDD
FFAVEKFPAA DFAITGIKPH GNNLYDVTGK LTIKGITNDI SFPATVVIDK GKLTANAKIK
VDRTKYDIKF RSKNYFENLG DKAIYDDFDL DITLLANAQ
|
|---|
| |