Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0261 |
Symbol | |
ID | 8356366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 311493 |
End bp | 312539 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644962408 |
Product | proline-specific peptidase |
Protein accession | YP_003119962 |
Protein GI | 256419309 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR01250] proline-specific peptidases, Bacillus coagulans-type subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTATT TAAAAAAACC GTTCGCATTA GTCGCATCCA TATTATCGCT GATGCTGCTT GCTAACTGTT CCGTGCCAGC ACAAAAAGAC GATAAGGCCA GATACCTTAT TACAGACACA ACGACCCTGC AGACAGGAGG CGTTAAGATG ATACCCATAA AGACACCTAA AGGCGTTTTC AACGTGTGGA CAAAGCGCAT TGGCAATAAT CCCAAAGTGA AGGTGCTGCT GTTAGCCGGG GGACCAGGCT TCCCTCACGA CTACCTGGAA GCGTTTGAAA GTTACTTCCC CGGAGAAGGA ATAGAATTTT ATTACTACGA TGAACTTGGT AATGGTAACA GTGATAAACC AGGTGACAGC AGCCGTTACA ACGTAGCAAG CGCTGTGGAT GAAGTGGAGC AGGTACGCCA GGCATTAAAA CTTGACAGCT CCAATTTTTA CCTGTTCGGA CACTCCTGGG GAGGCGCACT GGGTATGGAA TATGCAATCA AATACCAGAA CAACCTGAAG GCCCTGATCG TCTCTAACAT GGTAGCAAGC GGCAAAGAAT TCAACCGCTA TGTCCAGCAG GTACTGGTAA AACAGTTGCC ACCCGCCATA CTGGACACTA TAAATGATTT GTCAGCCAGG AACGATTATA GCAACCCCAA ATATTCCGAA CTTGTAACCA GGCATTTCTA TGCCCGCTTT ATTTGCCGGC TGCCATTGGA CCAATGGCCA GAACCACTTA ACAGAGCGTT TAGTAAAGTG AATACCCCTT ATTATCTGAC ATTACAAGGA CCTAGTGAAC TTGGCATCAT TGGCAGTTTA CAAACCTGGG ATATAAGCGC CAGGTTGAAA GAAATTGCCG TACCTGCATT ATTTATCGGC GCCGGATATG ATGAAATGGA CCCTGAACAT ATTAAATGGA TGAGCCAGCA GGTACCCCAT GGGCAGTTTT TGTACTGCGC CAATGGCAGT CACCTGAGTA TGTACGACCA GCAACCATTT TATATGAACG GGATCATACG ATTCATAAAA GAGGTAAATA ATAGCTCGGC AAACTAA
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Protein sequence | MMYLKKPFAL VASILSLMLL ANCSVPAQKD DKARYLITDT TTLQTGGVKM IPIKTPKGVF NVWTKRIGNN PKVKVLLLAG GPGFPHDYLE AFESYFPGEG IEFYYYDELG NGNSDKPGDS SRYNVASAVD EVEQVRQALK LDSSNFYLFG HSWGGALGME YAIKYQNNLK ALIVSNMVAS GKEFNRYVQQ VLVKQLPPAI LDTINDLSAR NDYSNPKYSE LVTRHFYARF ICRLPLDQWP EPLNRAFSKV NTPYYLTLQG PSELGIIGSL QTWDISARLK EIAVPALFIG AGYDEMDPEH IKWMSQQVPH GQFLYCANGS HLSMYDQQPF YMNGIIRFIK EVNNSSAN
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