| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0176 |
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| Symbol | |
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| ID | 8356276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 221066 |
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| End bp | 223840 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644962319 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003119878 |
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| Protein GI | 256419225 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACATT CTCTTGCGTC TGCACTGTTA TGTGTGTGCC TCCTTTTGAG TACCTTCCTC
TCCGCGTTTG CCATGGATAA TGGCAAAATC ACCGGTAAAG TAACTGACCA GAAAACAGGT
GAAGCCCTCA TTGGCGTAAC CGTTATCGTA CAGGGTACCT CTACAGGAGC GGTTACCGAT
GTTGAAGGTC GTTACACACT GAACGTAGCT CCAGGTACTT ACGTGCTGGA GTTCAAGTAT
ATGGGTTATC AAACCAAAGC CGTAAGCGAC GTAGTCGTGA AGTCCGGTGT TGCCACCCAG
CTCCCCATCA TTATGGATGA ACCTAAATCC AAAGAATTAC AAGAAGTTGT GATCAGAGGT
TCATTCAAAC AGGAAACTAT CAACGCTTTA TATACTGCTC AGAAAAATAA CGTCGCTGTA
TCCAGCGGTA TTTCTGCTGA ACAGATAAGA TCTTCCCCTG ATAAAAATAC CGGCGAAGTA
CTGAAACGTG TAAGCGGCGC CAGTATCCAG GATAACAAAT TTGTTGTTGT ACGTGGTCTG
ACTGACCGTT ATAACAACGC CACCATGAAT AACGTACTGT TACCAAGTAC AGAGCCTGAC
AGAAAATCAT TCTCTTTCGA TATCATTCCT TCTGGTCTGA TCGATAACAT GGTGATCAAT
AAAACATCTA CTCCTGATAA ACCAGGCGAT TTCGCAGGTG GTCTTATCCA GGTAAATACC
AAAGACTTCC CGGATGAAAA GTTTATCACC GCTTCTGCTG GTGTTTCTGT GAATGGCCTA
TCTACATTCA AAGATGCAAA GACCGGTATG AGAGGTTCTA CCGACTACTG GACATTTGAT
GACGGATCAA GAAAACTGCC TTCTGCTGTT CCTTCTTCTG CTGCATTCAA TAACCTGGCT
GGTAAAGCAA AAGATGATAT CAACAGGTCT TTCAAAAATA ACTGGAGAGT ATCCAATACA
ACCGTAGCGC CAGGTACCAG CATTCAGATC ACCGGTGGTA ACACTAAATA CTTTGGTGAG
CGTAAACTGG GTTACATTTT CTCTGTAACA CATAACCACA CTGAGCGTAA TCAGTTCGCA
GAGCGTAACG ATTTCGACAT CGATAACAAA GTGTACAGAC GTCATAACGT TGATACTTCT
AACAGATATT CAAGTGCACT GGGCGCTGTA GCGAATCTGG CTTACAGCTT CAAGAATAAC
AAAATATCTT TCAAGAACCT GTACAACCGT ATACTGGACA ATAACACGCT GTTACGTGAT
GTAGCTGCGG ATCCCAATCC TCCTTTCCAC TATCTGACAC AATCCATGAT GCTGACGCTG
ACACAGCGTT CTATCCTGTC ATCTACATTA CAGGGTGAGC ATAGTCTGAA AGGTGGAAAA
GTAGAATGGT TACTGAACTA TTCTAAAACT AAGAGAGATG ATCCGGACAT GCGTATCTCT
AACTATACAG ACAGTCACGC TATTATTGAT CAGCCGGTAA ATGGTGGTTC TTCCCGTGGT
TTCTTTACTG TAAAAGATAA CATCTACAAC GGTGGGTTGT CTTATCAGTT CCCACTGCTT
CAGAAGAGCA AAGACCATTC ACTGAAACTG GGTGTGTTTG AACAATACAG AAAACGTTAT
TCTATCTACA GACCATTCTC TTACCACTCT TCTCCTGATT TCCCTTATGA GAAGCTGGCT
TTATCTCCAT ATGAACTCTT CTCTAATGAG AACCTGGGAA GCAATGGTAT CTATCTGAGA
GATGATAAGG ATAACACCGG TGAATACAAT GCTACTTCTA ATCTGAGTGC AGGATATTTC
ATGTTTGATA ATTTTATCAC AAAGAAACTG AGAGTAATCT GGGGGCTGCG TTACGAGCGC
TACAACCAGC AGCTGAAACC AGTATCGACT GTTGCCAGCT ATACAACAGA TACTACTTTC
AACAGCTTCC TGCCTTCAGC GAACTTTGTA TATAATCTGA CAGACAAGAC TAACCTGAGA
TTGTCTTACT CTAATACTGT TGCGAGACCA GAATTCAGAG AGCTCGCAAC GTTCAGCTTC
TTTGATTTCC TGAATGCGGC AACCGTATTT GGTAATCCAA ATCTGAAACA GACCCGTATC
ACCAACATTG ATTTACGTTA CGAATTATAT CCTGCTGCCG GCGAAACATT CGCAGTAGCT
GCATTCTACA AGAAGTTTAA AGATCCTATC TCTGAAACAT GGTATAGCAT CGATAACAAC
GACCGTACAT ACATCAACCT GAATGATGCA AATACATTCG GAATTGAATT GGAAGCAAGA
AAGAACCTGG AGTTTGTAAT GGGCAGATGG GGTAAGAATT CCTTCATATT CGCTAACGGT
GCATACATCC ACTCTTCAAT CAAGAATCCA AACCAGACTG TACGTAACAT CAACGGTGAA
ACGAGAAGTA TGCCGGGTCA GTCTCCATAC CTGATCAATG CAGGTTTGCA GATTAACAAT
CCTAACAACG ACATGGGTGT AACCGTACTG TACAACAGAA TCGGTTCAAG GATCAACATT
GTGGGTGACG ACAGCAGCAA CAAACTGGAC GTGTTCGAGA ATTCCAGAAA CCTGCTTGAT
CTGCAGCTCA GCAAACGTCT GTTCAAAAAG AACGGAGAAA TCAAGCTGAA CATTTCAGAC
ATCCTGAACA ATCCGTATCT GTTGTATCAG AACAAAGACG ATAAAAGATC TTATAAGAAA
GGGACAGATT ATGTGTTCTA TCAATACAAA TACGGAACAA ATTTCTCTTT AAGCTTTTCC
TATACTTTCA GATAA
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| Protein sequence | MKHSLASALL CVCLLLSTFL SAFAMDNGKI TGKVTDQKTG EALIGVTVIV QGTSTGAVTD
VEGRYTLNVA PGTYVLEFKY MGYQTKAVSD VVVKSGVATQ LPIIMDEPKS KELQEVVIRG
SFKQETINAL YTAQKNNVAV SSGISAEQIR SSPDKNTGEV LKRVSGASIQ DNKFVVVRGL
TDRYNNATMN NVLLPSTEPD RKSFSFDIIP SGLIDNMVIN KTSTPDKPGD FAGGLIQVNT
KDFPDEKFIT ASAGVSVNGL STFKDAKTGM RGSTDYWTFD DGSRKLPSAV PSSAAFNNLA
GKAKDDINRS FKNNWRVSNT TVAPGTSIQI TGGNTKYFGE RKLGYIFSVT HNHTERNQFA
ERNDFDIDNK VYRRHNVDTS NRYSSALGAV ANLAYSFKNN KISFKNLYNR ILDNNTLLRD
VAADPNPPFH YLTQSMMLTL TQRSILSSTL QGEHSLKGGK VEWLLNYSKT KRDDPDMRIS
NYTDSHAIID QPVNGGSSRG FFTVKDNIYN GGLSYQFPLL QKSKDHSLKL GVFEQYRKRY
SIYRPFSYHS SPDFPYEKLA LSPYELFSNE NLGSNGIYLR DDKDNTGEYN ATSNLSAGYF
MFDNFITKKL RVIWGLRYER YNQQLKPVST VASYTTDTTF NSFLPSANFV YNLTDKTNLR
LSYSNTVARP EFRELATFSF FDFLNAATVF GNPNLKQTRI TNIDLRYELY PAAGETFAVA
AFYKKFKDPI SETWYSIDNN DRTYINLNDA NTFGIELEAR KNLEFVMGRW GKNSFIFANG
AYIHSSIKNP NQTVRNINGE TRSMPGQSPY LINAGLQINN PNNDMGVTVL YNRIGSRINI
VGDDSSNKLD VFENSRNLLD LQLSKRLFKK NGEIKLNISD ILNNPYLLYQ NKDDKRSYKK
GTDYVFYQYK YGTNFSLSFS YTFR
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