Gene Cpin_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0169 
Symbol 
ID8356269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp209819 
End bp210130 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content44% 
IMG OID644962312 
ProductYHS domain protein 
Protein accessionYP_003119871 
Protein GI256419218 
COG category[S] Function unknown 
COG ID[COG3350] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGA AGCATTTACT GAATGCATCC TATATACTGC TGCTTGCAGC CTTTATGACT 
GCCTGTGGCA ACTCCGGCAC ACAACACACT GCTGGTACTG ATTCTGTCAC TACACAACCT
GCGGAACATG CTCCGGCTGA AAATGCAGTT GTTGCCGGTA AACTGCCGGA TCCTGTGTGT
GGCATGCCTT ATGATACCAT GTACAAAGAG TGGAGTGTAT ATAAAACGGA TACTTTACAT
TTCTGTTCTC CTACCTGCAA ACGTGTATTT GAGAAAAATC CTGAGAAATA CGCAGGTAAA
CTGGGATTAT AA
 
Protein sequence
MTMKHLLNAS YILLLAAFMT ACGNSGTQHT AGTDSVTTQP AEHAPAENAV VAGKLPDPVC 
GMPYDTMYKE WSVYKTDTLH FCSPTCKRVF EKNPEKYAGK LGL