| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3880 |
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| Symbol | |
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| ID | 5742277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4768723 |
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| End bp | 4769235 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641294993 |
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| Product | shikimate kinase |
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| Protein accession | YP_001560966 |
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| Protein GI | 160881998 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG ATAATATTGT GTTAATTGGG ATGCCAGGCG CTGGAAAAAG TACGATCGGA
GTTATTTTAG CTAAAGTACT AGGGTATCAG TTTATTGATG CAGATTTACT TATTCAAGAA
AAAGAAGGGC GTCTCTTACA TGAAATTATC TCTAGCGATG GACTGGAACG CTTTATACAG
ATTGAAAATG AGGTAAATCA AAGCATTCAA ACAAAACATA CCGTGATTGC AACTGGAGGC
AGTGTTATCT ATGGTGAAGA AGCGATGAAT CATCTTAGAA GCATTGGTAC AGTCATATAT
TTAAAATTAA GTTACAATGA AATTAGTAAG CGTCTCGGAA ATATTATGCA AAGAGGAGTG
GTACTAAAGG AGGGGCAAGA TTTAGTAGGT TTGTATGAAG AACGCTGTCC TTTCTATCAA
CTCTATGCAG ATATTGTAAT AGATTGTGAA AATATGGATA TTGAATCTAC AATGGAGACA
ATTGTAGAAC GAGTGCACAC AATTATGGAA TAA
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| Protein sequence | MKKDNIVLIG MPGAGKSTIG VILAKVLGYQ FIDADLLIQE KEGRLLHEII SSDGLERFIQ
IENEVNQSIQ TKHTVIATGG SVIYGEEAMN HLRSIGTVIY LKLSYNEISK RLGNIMQRGV
VLKEGQDLVG LYEERCPFYQ LYADIVIDCE NMDIESTMET IVERVHTIME
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