| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3835 |
|---|
| Symbol | |
|---|
| ID | 5744787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4698116 |
|---|
| End bp | 4698547 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641294947 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001560921 |
|---|
| Protein GI | 160881953 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000426695 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACGG AACCCAGTGA TCTTATTATC ATGATGCATC ATTTGCGCTC TGTCGTAAGT
CAGCTGCGTC TGCAAAACGA TTTGACCTTT GGAGAATTTT GTGCGATGAG CATGATTGCA
GAATCACAAA AAGATGGCAA TCAGAAACTG ACACCGACTA GCTTGAATGA ACAACTTGGT
ACAAAGAAGC CGGCAACCTC TCGTATGCTT ACCGTTATAG AGAAAAAAGG TTTTCTTCAG
AAGGTAAGCG ATGCGAAAGA CCATCGGATT TACTATCTTG AACTAACAGC TTTGGGAAAA
CAAGCACTCT TAAGAGAGCA AGATGCCTTT CATAAATTGT TGGGAAGAAT AGGAAGGCGA
ATGGGAAAAG ATGAAATAAC ACAGATGGTT GTATCTCTTC AAAAGTTGGG GAACATATTA
GAAGAGGATT AG
|
|---|
| Protein sequence | MQTEPSDLII MMHHLRSVVS QLRLQNDLTF GEFCAMSMIA ESQKDGNQKL TPTSLNEQLG
TKKPATSRML TVIEKKGFLQ KVSDAKDHRI YYLELTALGK QALLREQDAF HKLLGRIGRR
MGKDEITQMV VSLQKLGNIL EED
|
|---|
| |