| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3818 |
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| Symbol | |
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| ID | 5744770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4671174 |
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| End bp | 4672757 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641294930 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001560904 |
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| Protein GI | 160881936 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00215503 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATTA GATTTGATGA AATGGAGTTA CAAACTCCGA TTATTAGAGC AATCGAGGAG
CTTGGTTATG AAGAAATGAC ACCGATTCAG GCTCAAGCAA TACCGGTTGT TTTAGAGGGG
AAAGATATCG TAGGTCAGGC TCAGACTGGT ACTGGAAAGA CTGCTGCGTT TTCTATTCCA
ATATTGCAAA AAATCGACCC AAAGGTAAAG GGTCTTCAGG CAGTTATACT TTGCCCAACA
AGAGAGCTTG CAATTCAGGT ATCTGATGAG ATGCATAAAT TCTCTAAGTT TATGCATGGG
ATTAAAGCAA TACCGATTTA CGGTGGCCAA GACATTACGA GACAGATTCG TTCACTAAAA
GCAGGAGTTC AGATTGTAAT CGGTACTCCA GGTCGTGTTA TGGATCACAT GAGAAGAAAA
ACAGTAAAGT TTGATAAGGT TTCTATGATT GCTTTAGATG AGGCGGATGA GATGTTAAAC
ATGGGATTCC GTGAAGATAT TGAGACTATC TTAAAGGAAA TGCCAGAAGA CCGTCAAACA
TTATTATTCT CAGCTACTAT GCCTCAGCCA ATTATGGATA TTGCAAGAAC ATATCAAAAG
GACGCTACTA TAGTAAAGGT AGTAAAGAAA GAGTTAACAG TTCCAAAGAT AGAGCAATAC
TACTACGAAG TAAGACCTAA GAATAAGGTT GATGTATTAT CTAGATTATT AGATATGTAT
TCTCCAAAGC GTTGCTTAGT ATTCTGTAAC ACAAAGCGTC AGGTAGATGA ATTAGTTACT
GCATTATCTG GCCGAGGATT CTTTGCAGAA GGTCTTCACG GTGATTTAAA GCAGCAGCAA
AGAGACCGTG TTATGAGTTC TTTCCGTACT GGTAAAGCAG AAATCCTAGT TGCTACCGAT
GTAGCAGCAA GAGGTATTGA CGTAGATGAT GTGGAAGCAG TATTTAATTA TGATGTACCA
CAGGATGAAG AATATTATGT ACACCGTATT GGACGTACCG GTAGAGCAGG AAGAACTGGA
CGTGCATTTA CTTTAGTAGT TGGAAAAGAA GTATATAAAT TAAGAGATAT CCAGCGTTAT
TGTAAAACTA AGATTAAAGT TATGCCTATT CCATCTGTTA ATGATGTAAC AGCAGTTAAG
GCAGAAAAAA TCTTAGACCG CATTAATGAG CTAATGGATG CAGAAGATTT AACAAAAATG
ATTTCCATTA TCGAAGCTAA GATAAATGAA TCAGATTATA CAGCTCTTGA TGTCGCAGCC
GCATTCTTAA AGATGGCAAT GGGAAGTGAT AGTCAACCAG AAGAACAAGC AGTTCCTGAC
TTTGGTGATA CTGGAGCTGA GCAAGGAATG GTTCGTTTAT TTATCAATCT TGGTAAAAAG
CAAAACATTA GACCAGGTGA CATCCTAGGT GCGATTGCAG GCGAGACAGG AATGCCAGGA
AAGCTTATTG GTAGCATCGA TATGTATGAC AAATATACCT TTGTTGAGGT ACCTAGAGAA
TATGCAGCAG ATGTCATTCA AGTGATGAAG GAATCAAAGA TTAAAGGTAA ATCGATTAAT
ATAGAACCAG CGAACCATAA GTAA
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| Protein sequence | MTIRFDEMEL QTPIIRAIEE LGYEEMTPIQ AQAIPVVLEG KDIVGQAQTG TGKTAAFSIP
ILQKIDPKVK GLQAVILCPT RELAIQVSDE MHKFSKFMHG IKAIPIYGGQ DITRQIRSLK
AGVQIVIGTP GRVMDHMRRK TVKFDKVSMI ALDEADEMLN MGFREDIETI LKEMPEDRQT
LLFSATMPQP IMDIARTYQK DATIVKVVKK ELTVPKIEQY YYEVRPKNKV DVLSRLLDMY
SPKRCLVFCN TKRQVDELVT ALSGRGFFAE GLHGDLKQQQ RDRVMSSFRT GKAEILVATD
VAARGIDVDD VEAVFNYDVP QDEEYYVHRI GRTGRAGRTG RAFTLVVGKE VYKLRDIQRY
CKTKIKVMPI PSVNDVTAVK AEKILDRINE LMDAEDLTKM ISIIEAKINE SDYTALDVAA
AFLKMAMGSD SQPEEQAVPD FGDTGAEQGM VRLFINLGKK QNIRPGDILG AIAGETGMPG
KLIGSIDMYD KYTFVEVPRE YAADVIQVMK ESKIKGKSIN IEPANHK
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