| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3732 |
|---|
| Symbol | |
|---|
| ID | 5742931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4586209 |
|---|
| End bp | 4586772 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641294844 |
|---|
| Product | phosphodiesterase |
|---|
| Protein accession | YP_001560818 |
|---|
| Protein GI | 160881850 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0622] Predicted phosphoesterase |
|---|
| TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000397737 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTTA TGTTTGCATC TGATATACAT GGTTCTGCAT ATTATTGTGA AAAATTAATG
GAGTGTTATG AGAAGGAACA ACCAGAGAAA TTAATATTAC TTGGTGATCT TCTATATCAT
GGCCCTAGAA ATGATTTACC TAAGGATTAT AATCCAAAAG AAGTTATTCG TATGCTAAAT
GAAAAGAAAA ATGAAATCTT ATGTGTAAGA GGTAATTGTG AGGCAGAAGT GGATCAGATG
GTACTGGAAT TCTCAGTAAT GTCTGACTCT TTGTTACTTT ATGTAGATGG AATTACCATC
TTTGCTACTC ATGGTCATCT TTTTAATGAA GAGAAGCTTC CGCCAATTAG CGATAAAGAT
ATACTAATTC ATGGACACAC CCATGTCCAA GCGATTCGTA AGATGGAGCA AGGTATGTAC
TTAAACCCCG GATCCGTTTC GATTCCAAAG GAAGGTAATA AAAACAGCTA TATGATTTAC
GAAAATGGTA CCTTTTTAAT CAAATCTTTG GATGGAGAAG TAATTAGAGA GTGGAGTGTG
AAGAGAATTT CTAAGGTACT ATAA
|
|---|
| Protein sequence | MRLMFASDIH GSAYYCEKLM ECYEKEQPEK LILLGDLLYH GPRNDLPKDY NPKEVIRMLN
EKKNEILCVR GNCEAEVDQM VLEFSVMSDS LLLYVDGITI FATHGHLFNE EKLPPISDKD
ILIHGHTHVQ AIRKMEQGMY LNPGSVSIPK EGNKNSYMIY ENGTFLIKSL DGEVIREWSV
KRISKVL
|
|---|
| |