Gene Cphy_3512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3512 
Symbol 
ID5743623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4336348 
End bp4337550 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content36% 
IMG OID641294622 
Productcell wall hydrolase SleB 
Protein accessionYP_001560600 
Protein GI160881632 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000979534 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAAA TATATTCATT TCTTCGGACG ATGAAAGACA AGGAAAAGCA CTTTGAGAAA 
GGTATTCAAT ATAAACACAG CAAAAGAATT GCAATTGTTG CCTATGTTAT GACTGCTATA
CTTCTTGTTA CATCTTTCGG AGATATCCCT GGTTTACGCC TGTACTCTCT AGAGTATATG
GTTAATGCAG CTACGCACGA AACTGAGGGA CAAGAAAATG ATACACAAGA TTTATCGTAT
CAGAAAAACA ATGCGAAGCT GTTAGAAGCA TCACTCCTGG TGTATCCGTT TGGACAATTA
TACCAAGGGG AGTTAACGAA AGAAGACATA GAATCATTTT CGGATAATAA CACAGTGGCA
AAAGTAGCAA TTACAGATCC TGTGGAACAA TTAAAGCAAA TGCTCTATGA TACCTCGAAT
CCAAAAGAGG AAGAGATTGT TTTATTAGGC CTAGAGGATT CCGAAAAGGA ATTAACTAAC
TTGACTACCG CTGCACAAGT TGAAGCAGGA GTTGCATTAG CAACCATGGC TGTGGAAAAT
TCCACAAACA CAGTAGGAAA TAAAGATAAT ACAGAGGCTA TTAAGGAAAA TCAAAAAACA
GAAACTAGCA CGGATAGCCC AAAAGCAGAA ACTAGTAAGG ATAGCCAAAA AGCAGAAACT
AGTAAGGATA GCCAAAAAAC AGAAACTAGT AAGAAAAAAG AAAAAGCGAA GGATAACGCG
AAAGATTCTG ATAGTAAGAA GGATAAATCA AACACTACTT CTACAAAATC AGATGCCCTT
GTAAAGACAT TAAACAAGAA AATGATAAAG TCTTTATCAC AAGATGAACT TGATGTTTTA
TATCGTATTG TTGAAGCAGA AGCAACTGGA GAAGATATTT ACGGTAAGAT ACTTGTGGCA
AACGTTATAT TAAATCGTGT AAACAACAAA AATTTTCCAA ATACAGTAGA AAAAGTTGTG
TTTCAAAAGA GCGGTAATAC TTATCAGTTC TCCCCAACCA AAGATGGTCG ATATTGGTCT
GTGAAGATAT CCAAGGAAAC GATTGAAGCA GTAAGCCGTG CCCTTGAGGG AGAGGACTAC
AGTAATGGTG CCGTGTACTT CTTTGCGAGA AAGCTAACAA GTAAGAATAA AGCTTGTTGG
TTTGATAACA GTCTTCGTAA GGTAGTAAAG TATGGTTGCC ATGAATTTTA TAAGGACAAG
TAG
 
Protein sequence
MLKIYSFLRT MKDKEKHFEK GIQYKHSKRI AIVAYVMTAI LLVTSFGDIP GLRLYSLEYM 
VNAATHETEG QENDTQDLSY QKNNAKLLEA SLLVYPFGQL YQGELTKEDI ESFSDNNTVA
KVAITDPVEQ LKQMLYDTSN PKEEEIVLLG LEDSEKELTN LTTAAQVEAG VALATMAVEN
STNTVGNKDN TEAIKENQKT ETSTDSPKAE TSKDSQKAET SKDSQKTETS KKKEKAKDNA
KDSDSKKDKS NTTSTKSDAL VKTLNKKMIK SLSQDELDVL YRIVEAEATG EDIYGKILVA
NVILNRVNNK NFPNTVEKVV FQKSGNTYQF SPTKDGRYWS VKISKETIEA VSRALEGEDY
SNGAVYFFAR KLTSKNKACW FDNSLRKVVK YGCHEFYKDK