Gene Cphy_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3390 
Symbol 
ID5743667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4146977 
End bp4148716 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content38% 
IMG OID641294496 
ProductFAD linked oxidase domain-containing protein 
Protein accessionYP_001560482 
Protein GI160881514 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGC CATATACAGG ATTTGAACCT AAATGGGTGA AAGAAGCAGC GCCAAAAAAC 
AGTTATCGAT CTATCTTTCG CTGGGGAGAC CCTGAGTTTG TGAAATATCC TAAAGAATCA
TTGTTTAAGA TGATGAAGGA AAAGTTTGAG ATGAAGGATG AAGATTTCAA ACAATATACC
GGTGATATTG GAATGGAGAA AGTAAAATTA GATATTCCAT GTGGTTTAGA TAAAGTACAT
ATCAAGGCCC TAAAGGATAT AGTTGGAAAC GAATTTGTAA CAACGGACGA TTATCCACGT
CTTGCTGTTG CCTATGGAAA GACCGGTTAT GATGCATTGC GGCTTCGTGA AAGACGAGTT
GATTGTGTAC CAGATGTTGT TGTCTATCCT GATACAACGA AGCAGATTGA ACAGATTGTT
GAATATAGTA CCAAACATAA TATACCTCTT TATGTGTATG GTGGCGGTAG TAGTGTTACA
AGAGGTGTGG AACCAATAAA GGGTGGGATC TCGCTGGATA TGAGGCTAAG GTATAACAAA
GTACTTTCCT TTAACGAGAT TGATCAAACG ATTACCGTTC AAACGGGTAT GTCGGGACCA
CAGTTAGAAG AGGCGCTAAA TCAAGCTCCT ACCTTGTTTG GTGCTAAGAG AGCATATACC
TGTGGGCATT TTCCGCAGTC TTTTGAATAC AGCAGTGTCG GTGGATGGGT TGTAACAAGG
GGAGCAGGTC AAAACAGTAC TTATTATGGA TGTATCTCTG ATATTGTAAT GGGACAAAAA
TATGCAACGC CAATTGGAAC GATTCAAACA AGTCCTTATC CAATGGAAGC TACCGGTCCA
AATTTGAATC AGATAATGAT GGGTGGGGAA GGGACTTTTG GTGTTTTGAC AGAAGTAACT
TTAAAAGTCT TTCGCTATAT GCCGGAAAAC AGAAAAAGAT TTTCTTATAT TTTTAAGAAC
TGGGAAATAG CTCAGGAGGC AGCTAGAGAA ATGATGCAGT GTGAGGCAGG ATTTTCTTCC
GTTTTTCGAT TATCCGACCC TGAAGAAACA AATTTAATGC TTCGTTTATA CAATGTAGAT
GAAACTCCTT TACATAAGAT CTTTGATATC AGGGGATATA AAGATATGGA ACGCTGCCTG
TTTTTAGGAT TTACAGATGG TGAAAAAGGA TTTTCTAAAA ATGTAGCTAA GAATATTAAA
AGAATTGCAA AACAATATGG TGGCATGAGT TTGACCTCAT TTGTAACGAA GAGTTGGGAA
AAAGGCCGAT TTAATGACCC ATACCTTAGA GATACTTTAA TGGATTTTGG TATTACAACC
GATACATTAG AATGTACTGT GAACTGGTCC AATATGGCAC AGGTACATAG GGATGTTAGA
GAAGTCTGCC ACAAATTACC GAACACCATT GTAACAACTC ATATGTCACA TTGCTACCCA
CAGGGAGCAA ACCTTTATTT TATCTTTATT ACCAAGTTAA GTGATGCTGA AAAGTTCAAA
GCATATCACA GCACTATCCT TGATGCAATT CAGAAATCCG GTGCAGCTAT GAGTCATCAT
CACGGAATAG GTAAAATGTT TGCACCTTGG TTAGAAGGTC AGCTAGGCAG AAAAGAATAT
GGAGTATTTA AGGTTCTTAA GGATTATTTT GATCCTGGGT ATAATATGAA TCCAGGCGGA
ACACTTGGAT TAGATTTAAA GGAAGAAGAA AAGAGATTTC TAAAATCAGA TATTAAATAA
 
Protein sequence
MSKPYTGFEP KWVKEAAPKN SYRSIFRWGD PEFVKYPKES LFKMMKEKFE MKDEDFKQYT 
GDIGMEKVKL DIPCGLDKVH IKALKDIVGN EFVTTDDYPR LAVAYGKTGY DALRLRERRV
DCVPDVVVYP DTTKQIEQIV EYSTKHNIPL YVYGGGSSVT RGVEPIKGGI SLDMRLRYNK
VLSFNEIDQT ITVQTGMSGP QLEEALNQAP TLFGAKRAYT CGHFPQSFEY SSVGGWVVTR
GAGQNSTYYG CISDIVMGQK YATPIGTIQT SPYPMEATGP NLNQIMMGGE GTFGVLTEVT
LKVFRYMPEN RKRFSYIFKN WEIAQEAARE MMQCEAGFSS VFRLSDPEET NLMLRLYNVD
ETPLHKIFDI RGYKDMERCL FLGFTDGEKG FSKNVAKNIK RIAKQYGGMS LTSFVTKSWE
KGRFNDPYLR DTLMDFGITT DTLECTVNWS NMAQVHRDVR EVCHKLPNTI VTTHMSHCYP
QGANLYFIFI TKLSDAEKFK AYHSTILDAI QKSGAAMSHH HGIGKMFAPW LEGQLGRKEY
GVFKVLKDYF DPGYNMNPGG TLGLDLKEEE KRFLKSDIK