Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3336 |
Symbol | |
ID | 5741616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4061107 |
End bp | 4063470 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641294437 |
Product | alpha-tubulin suppressor and related RCC1 domain-containing protein |
Protein accession | YP_001560428 |
Protein GI | 160881460 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [Z] Cytoskeleton |
COG ID | [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0329371 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG AGTCAAAACA GTATGGAGAA CTTAATGAAA ATGATTTAAA AATTAATATG AAAGCAGTAT ATGAAGGAAT GAAATACCAA TCGAAATCAA AGCAAGAGTT GTTAGCACGG ATTCAACAAA TAGAACTAAG AAAAAATGAC ACTAGTTCAG AAGAAACGCA TGACTATGTC TATTTGAACT TAAGAAATCA AAAGAAAATA GAAGGAAGAG GAGTATCTTT CTTAAAGCTA GGAGCACGTA TTTTGACGAT AGCAGCAGTT ATATTCTTTG TTAGTGTCTT GATTTATAAT GTTCATATTC GATTAGAGAA ACAAAAAGAA GCAGCGGTAG ATTTAAATGA GGTAGATCAA ATAAATAAAG AAAATAAAGA ACAAAACGAA AATAAAGAAC AAAACGAAAA TAAACAAGGA GAACATAACT CACAGAATTC AGACAGTGAA CAAAGCCATG AGAATCAGCA AAACAAAGAG AGTAATCAAA TTAATGAAGA GTACGGGAAA GATAATTTAT TCGGGAATGA AAGAGAAGTT CCTGTCAGAG TTTCTATGGA AGAACTTCAT CTTACAGGAG AGTTTAGGCT ATCGGATTGT TATCTTACCA ATGTAGTGCA ACCAGAGAAT CAATATATTA TAGATAAAGA AGGAATACTA TGGGGACTAG GTGATAATCG TGCAGGACAG CTTGGTCAGA GTGTGCAAGG TTATTTCGGT GAGGCATATG TTGATTATAC CAAGGAACCA GTGAAAATAG CAGAGAATGT TGTCCATGTA GATGCTAGCA GAAATTATTT TGCTGTATAT CTAACGGAAG ATGGCAGTCT CTATGGAATG GGGGCTAATT TTGATGGACT TATGGGAATA AAACAGGTAG GCTCGTATTT TAATCATTCT ATCGATGTCT GTGCAATTCG TCCTGTTTTG TTAATGAAGG ACGTTGCTTA TGCTAGATGT GGTGAATATC ATATCCTAGT ACTTAAAAAA GACGGAACTG TATGGAAAAT TGGAGATACC AAGGATGATA GTCAAAAACC AGATTCGATG GGAACAATAG ATTGGTATGA AAACACCCCG ATTTCGGAAC CAAAGAAGAT GTTAGAAGAT GCAATCTATA TTTCCACAGA TAGCTTTCAA TGCGCAGCAA TCCGCTCGGA TGGAACTTTA TGGACTTGGG GAGATAACAG AAAAGGAGTC TTAGGTACTG GAAATTATGA AGAAGGTACT GTAGAAACCC CTCAACAGAT CGCTACTGAT GTAAATATGG TATGGCTCGG TGAAGTAGCA TTTAATTCTA CAGTTACGAA GATAACTTAT GGAATGAGAC AAAGTGAAGC AAGGCTTCCT ATTCCTCAAA TGATTATTCA AAAGAAAGAT GGTACCTTTT GGGGTTGTGG GGTAGGGTTT GGTGAGTACG AGAAAATAGT TAGTGGAGAG AAAATTAAAC TATCAGCAGA CTTAGTGCCA GTAGGGTTAA CCAGCAAAGA TAGTCAAATC ATGAATCATG AACTTAGAGA TTTTCCTTTA GGGACTTCAT ATTTCGAGGT GATTCAGTAT CTAAAGAAAA AGCAAATCTC TTATCAAGCA TTTGAAGTTA GTAATGAAAT TGAGATTAGT CATAATTACT TTGGAAATCA ATATGCTTGT AGTGTGCTTG AATTTTCGGA TAGTGGTAAG CTAGAAACTA TTGAAATTGG TTTTGGTTTC TCACCAGAGG GCAAGATTCG GGTTCAGAGT TCTGTAGAAG AGGTTCAAAG TATCTATGGG GAAGAGGATA TAAGCCTTTA CAAAAACAAT GGAAGTATTA TAAAAGAGTA TGTCTATGCA AATGGATATC TACAGATATC GAGTAGAGAT GGTGCTGTTA CTAATATTAA GATTAGTAAA TACTCTTTTT TACCCCAAGT AATTATGGAG AAGCTGTGCA GTAAAGAAGA ACGAACCTAT CAATCAGAAC AGGATAAGTT GATGGAAATT CCACCAACGA TAAATGAATT TGAATTACAG AATGGTAAGG TTATTCTTTA TGAAACCGTA GATAGTCAAT CATTAACTAG ACAATATCAG GTAGAAACCA TACCATGTAA ACTTGGTAAG GCGGTAGTGG TAACTAGAAG TACAACAATT GATAATGAAA CAAAAGTGGA TCAGTTAATA CTTTCCATCA TGGATGATAA ATTTGATAAA GTGCTAGCCA AAGTAATTAA ACTGAATGCT ATTGGAGGTA GTCACATTTC TATAAACGAA CAAGAAGTTA GTGTGGAGTA CTCAAAAAAT CCTAAGAAAA TAATAGAAAA TGCATCAGAT AAGGAAATAG GAAAAATTTA TTTAACAGAT GATGGCTGGG TTGAAAGAAA TTAA
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Protein sequence | MKKESKQYGE LNENDLKINM KAVYEGMKYQ SKSKQELLAR IQQIELRKND TSSEETHDYV YLNLRNQKKI EGRGVSFLKL GARILTIAAV IFFVSVLIYN VHIRLEKQKE AAVDLNEVDQ INKENKEQNE NKEQNENKQG EHNSQNSDSE QSHENQQNKE SNQINEEYGK DNLFGNEREV PVRVSMEELH LTGEFRLSDC YLTNVVQPEN QYIIDKEGIL WGLGDNRAGQ LGQSVQGYFG EAYVDYTKEP VKIAENVVHV DASRNYFAVY LTEDGSLYGM GANFDGLMGI KQVGSYFNHS IDVCAIRPVL LMKDVAYARC GEYHILVLKK DGTVWKIGDT KDDSQKPDSM GTIDWYENTP ISEPKKMLED AIYISTDSFQ CAAIRSDGTL WTWGDNRKGV LGTGNYEEGT VETPQQIATD VNMVWLGEVA FNSTVTKITY GMRQSEARLP IPQMIIQKKD GTFWGCGVGF GEYEKIVSGE KIKLSADLVP VGLTSKDSQI MNHELRDFPL GTSYFEVIQY LKKKQISYQA FEVSNEIEIS HNYFGNQYAC SVLEFSDSGK LETIEIGFGF SPEGKIRVQS SVEEVQSIYG EEDISLYKNN GSIIKEYVYA NGYLQISSRD GAVTNIKISK YSFLPQVIME KLCSKEERTY QSEQDKLMEI PPTINEFELQ NGKVILYETV DSQSLTRQYQ VETIPCKLGK AVVVTRSTTI DNETKVDQLI LSIMDDKFDK VLAKVIKLNA IGGSHISINE QEVSVEYSKN PKKIIENASD KEIGKIYLTD DGWVERN
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