| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3217 |
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| Symbol | |
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| ID | 5741995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3921799 |
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| End bp | 3923274 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641294317 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001560310 |
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| Protein GI | 160881342 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTTTA TAATACTGTT AAAGATATAC GGAAAATATT ATACAAGAGA TAAAGCTTAC
TCTGATGATG TTTATGCCAA ATTATATTGC GAGTGTCGGA GTAGAAAATC TACTTTAGAA
GGAGAGAGTG ATATGGTTAG AAAAGTCTAT AATATATTAG ATTATGGAGC TGTAGCAGAC
GGTGTAACTA ACAATGCGGC TACAATTCAA AAGGCTATTG ATGAAGCAAC AATCCATGGA
GGACAAGTAG TTGTTCCTGC GGGTAATTAC TTAAGTGGAA CAATTATCTT AAAAAGTAAT
ATAGATTTTC ATTTGGAGAT GGGAGCTGTA TTAATTAGTA GTCTGAAGGA AGAAGATATC
CTAGATTTTG CAAAGCTATT TGAAGATGAT AATCAAACGA CTGGATGGGA TGGAGGATGT
TTTATATTCG CTTGTCATGA AGAAAATATT ACAATATCGG GACAAGGAAC TATCTACGGA
CAGGGAGATA AGGTATTCTT TGATGACAAT GCAGATAATG GTGCACATGA ATGCCCATTA
AATGTATCGG CCTTTCGTCC AAGAACAACG TTTTTAGAAG ACGTTACAAA TCTAACGGTA
AAGGATATTA CAATCAGAGA TGCAGCTTTC TGGACCTTAC ATATGGCTGG TTGCCGCCAC
GTTCTTGTAA AAGATATTAA GATATTAAAT GATATTCGTG GTGCTAATAA TGATGGCATT
GATCCAGATT GCTGTCAGGA TGTTATGATT AGCGGATGCT TAGTAAAGAC AGGGGATGAT
GCAATCGTAG TTAAAGCGAC GAAACCGATG TCTCAAAAGT ATGGAGCTTG TGAAAATATA
GTGATTAATA ACTGTATTCT ATATTCACGT GATTCGGGAT TAAAGATTGG AACAGAGACT
CATGGAGATA TCCGAAATGT TATGCTTAGT GACTGTGTAA TTAAGGAGTG CTCTAGAGGT
GTTGGTATCT GGGTAAGAGA TGGGGCTACA ATAGAAGACA TACACGTGCA TCATGTTACT
GGAAGCGTCT TAAAGTATGC AGATGGAGAA CGCTCAGAAG GCCCTACCAT GTGGTGGGGG
AATGGAGAGC CTATCTTTAT TAATGCAACT TACCGAAATG AAAATCGTAA CTATCCAGGA
AAGATAAGAA ATATAACCTT TGACCATATA TATATGAAGG CAGAATCCAG TGTATTCTTA
GCAGGAGAAG AGGATGCAAG GATTGAAAAT ATTACGATCT CTAATCTTGA GGTTACAATG
TGCAGTCAAG GAACTCAAAA TTCTGGCTTT TTTGATGAAC AACCATCCCT CCGTCATGTA
TATCCTCATA GTATTCCAGC TGTTTACGCT AGGAGTGTTG ATGGGCTTCG TGTTAGTGGC
AGAGTTCGTT ATGAAGGGCC ATATCACATC TCTAAGAATA AATTATATGA GTCTGAGGAT
TGTACCATGG AAGAAGTTAA TCTTAAAGAG AGATAA
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| Protein sequence | MSFIILLKIY GKYYTRDKAY SDDVYAKLYC ECRSRKSTLE GESDMVRKVY NILDYGAVAD
GVTNNAATIQ KAIDEATIHG GQVVVPAGNY LSGTIILKSN IDFHLEMGAV LISSLKEEDI
LDFAKLFEDD NQTTGWDGGC FIFACHEENI TISGQGTIYG QGDKVFFDDN ADNGAHECPL
NVSAFRPRTT FLEDVTNLTV KDITIRDAAF WTLHMAGCRH VLVKDIKILN DIRGANNDGI
DPDCCQDVMI SGCLVKTGDD AIVVKATKPM SQKYGACENI VINNCILYSR DSGLKIGTET
HGDIRNVMLS DCVIKECSRG VGIWVRDGAT IEDIHVHHVT GSVLKYADGE RSEGPTMWWG
NGEPIFINAT YRNENRNYPG KIRNITFDHI YMKAESSVFL AGEEDARIEN ITISNLEVTM
CSQGTQNSGF FDEQPSLRHV YPHSIPAVYA RSVDGLRVSG RVRYEGPYHI SKNKLYESED
CTMEEVNLKE R
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