| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3160 |
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| Symbol | |
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| ID | 5743247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 3858979 |
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| End bp | 3862536 |
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| Gene Length | 3558 bp |
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| Protein Length | 1185 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641294260 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001560254 |
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| Protein GI | 160881286 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGTC AAGTACATAA CAATCGAAGA TTAATGAATG ATGGCTGGAG TTTTTCCAAA
CATCAGCTAG GCGCTACCTT ACAACAAGTG TTAGATGCAA AAACAGAATG GCATCCCGTT
GATTTGCCCC ACGACTGGTT AATTTATAAT ACCCACGATT TGTATGAAAC AGGAGAAGGT
TGGTACAGAC GTACGTTATC CATGGAACAC CTGAAAAATA AGGAGCGATA TATATTACGT
TTCGAGGGCG TGTATATGAA CTCGACCCTC TATGTCAATG GAAGGTTTGC TGGAGAGTGG
AAATACGGTT ACTCAACATT TGAATTCGAT ATAACCGAGT TTTTAACAGA AGGTGGCAAT
GAAATTGTGA TGCAAGTTAT CTACGAGTCA CCGAACTCGA GATGGTATTC CGGTGCAGGT
ATTTATCGTA ATGTCTGGTT CCATACCTAT CCTGAAGTAC ATATTAACCC AGATGGAATT
TATATTTCAA CAGAAAAAGT GGATGAGGAT TTTTACGTTT TCCTATCAAC CGAAGTTTCC
TCTTTACCGA TCAGTATGGA ACCTGAGCTT ACAATACCAG AGGATTTTCA TGGATTAGAC
AAGGATTCCA CATCTACACT CGAACTTCGC CATACTGTAT GGTCGCCAAG TCATGAATTA
GTTTGCACCC ATACTGTCGA TGTTACAAGT GAGGTAGTAA AGAATGCCTT TTATGTACAA
GATAGTAAAC TACATATTAT TTCACCTCTT CTTTGGGAGC TTTCGTCACC AAATTTATAT
CAAGTGCAAA CTGATATTAT CAAAGATAAT ATTATAATAC AGTCCGTAAC ACAAAACATT
GGTTTTCGCA CCATAGAATA CACCTGCGAA GAAGGCTTTT TCCTTAATGG TAAACATGTA
AAGCTATATG GAGTATGTCA ACACCACGAC CTTGGTAGCC TTGGTGCTGC TATTAATCGT
ACTGCCCTTC GTAGACAACT AACGATTTTA AAAGAAATGG GTGTGAATGC TATTCGTACT
TCACACAATA TGCCAGCAGT AGAGTTAATG GAACTTGCAG ATGAGATGGG ATTTTTGATT
AATTCGGAAG CCTTTGATAT CTGGGAGCGT TCAAAAACAA CCTATGATTA TGCTCGTTTC
TTCCCAAAAT GGGCAGATAA AGATGTCGCT AGCTGGATTC GTAGAGACCG CAACCACCCT
TCTCTCATCA TGTGGAGTAT TGGAAATGAA ATCTATGATA CACATGCAGA CGAGCGTGGT
CAGGAAGTTA CTAGAATGTT ATTAAGCTTT GTTCGAAAAC ATGATTCTCG CATCAATGCT
CCTGTAACCA TCGGCTCCAA TTACATGGCA TGGGAAAATG CTCAGAAGTG TGCTGATATC
GTAAAACTAG CTGGATATAA CTATGCAGAA CGACTCTACG GGGAGCATCA TGAATTACAT
CCAGATTGGA TGATATACGG AAGTGAAACG GCATCTACCT TACAAAGCCG TGGAATCTAT
CATTTCCCAT ATTCAAAGGC AATCCTTGCA GACGATGATG AGCAATGCTC TTCCCTTGGT
AATACGACTT CAAGCTGGGG AGCACGAAGC ACAGAATACT GTATTACGAA AGACCGTGAT
GCCACATTTA GTGCCGGACA ATTCATCTGG ACTGGTTGGG ACTACATCGG AGAGCCAACT
CCATATTTTA CGAAAAACTC TTATTTCGGT CAGGTAGATA CCGCTGGTTT TAAGAAAGAT
ACATTCTATA TCTATCAGGC AGAGTGGACG GATTATAAAA AATCACCAAT GGTACATTTA
TTCCCATACT GGGATTTCTC CAAAGATCAG GTGATTGACT TAAGGGTATG CTCCAATGCC
CCAAGAGTGG AATTGTTTTT TAATGAAAAC TCCCTAGGAA CCTATGATAT TGACCACAAA
CATGGTACAC AGCTATGTGG CCATTGGCAG TTACCATATG AAGAAGGTAC CTTAAAAGCG
GTTGCATATG ATGAATACGG AAATATTATA GCAACAGATA CCCGTACCTC CTTTGGTGAT
GCCGCTAATA TTAAATTATC ACCGGATAAA ACCACCATGC TTGTGAATTG CCAAGACCTT
ATTTTTGTTG AAATTAGCAT GGAAGATTGT AATGGCAATC CAGTAGAAAA TGCAAATAAT
CGTGTTACCG TAGAAGTTAC GGGTGCTGGT CGTCTAATTG GACTAGATAA TGGTGATAGT
ACCGATTATG ATCAATATAA GGGAATCAGC CGAAGATTGT TCAGTGGAAA ATTACTTGCA
GTTATAGCAT CAACCTTAAC ACCAGGTGAA ATTACAATGA AGGTTACCTC AGAAACTTTA
CCAGCAAAGA CTCTCTCCTT TACTTCCATT CCATGTGAGT ATCCAGAAGG TCTTAGCGAT
AATATGAGGA ATACGGATCA CATCATTTAT CCAGTACTGA ATCCGAAAGT TATAATTCCT
ACTACGGATG AAGCCGAGAT TCCGATTCGT AAACTCGAAA TAGTTACACC GAATGGGACT
ACTCTTTCTA AAGATTTAAG TACAATTGAG GCATATGTAA TCACTCATCC AGCAAATGCT
ACCTATCAAG ATATCGATTG GAGAATAACC AATGGATCGG GTATAGATTC CAATCTAGCC
AGATTAGAGA AGGATGGTAC CAAGGTAAAG GTAATTGCCC TTGGTAGCGG TAAAGCTTAT
CTTCGTTGTA CCTGTAGGAA TGGTGCAGAT AAGGTACGTA TGATTTCTGA AATAGAGCTT
AACTTCCATG ACCTTGGAGA AGCTACCATG AATCCGTATG AATTTATATA TGGTGGTTTA
TACTCTTGGT CCAATACAAA CCTTACCAAC GGAATTGAGC GCGGTATCTC CTCTCTGCTA
CCAATGGATA CTTACATTTG TTTTAAAAAT GTAGACTTTG GCTCCTATGG ATCTGACGAG
ATTACTGTTC CAATCTACTG TCTTGATACT GAGCTTCCAA CTTTTGAGAT TTGGGAAGGT
ATCCCACATG AAGAAGGAAG TGAATTACTA GCAGACTGTT CATTTAGTAA AAAGCCAATA
TGGAATCACC ATCAACCGGA AACCTATCGA TTAAAGCGTA GAGTAAAAGG TATCGTAACA
ATTTCCTTCG TTGTATTTAA ACGATTAAGC GTTCAAGGAT TTCAGTTTAC CAATCCACAA
AAAGGATTTG CAAAATTATT CGCTACTGAT TGTGACCTCA TATATGGAGA TACCTTTACA
AAGAAAGCTC CTCGCATTGA AGGAATCGGG AATAACGTAT CCTTGGAATT TTCAGAGATG
GATTTCGGAG AACAGGGCAT TACGAAACTC TCTATCTGTG GTCATTCTCC GATTGAGAAG
AACACCATTC ATGTAAAGTT TATTTCAGAA GAAGGTAGTA TGCTCTATAA TAGCATTGAA
GAACTTGCAG AATTTACTTT TACGAATGAG TACGAAGTAA AAGAGTTTGA ATTCTCTAAG
AAGACAGGTA AATATACTGT TACCTTTATA TTCCTACCGG GCAGTAATTT TGACTTTGAG
TGGTTTAAGT TTGAATAA
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| Protein sequence | MSSQVHNNRR LMNDGWSFSK HQLGATLQQV LDAKTEWHPV DLPHDWLIYN THDLYETGEG
WYRRTLSMEH LKNKERYILR FEGVYMNSTL YVNGRFAGEW KYGYSTFEFD ITEFLTEGGN
EIVMQVIYES PNSRWYSGAG IYRNVWFHTY PEVHINPDGI YISTEKVDED FYVFLSTEVS
SLPISMEPEL TIPEDFHGLD KDSTSTLELR HTVWSPSHEL VCTHTVDVTS EVVKNAFYVQ
DSKLHIISPL LWELSSPNLY QVQTDIIKDN IIIQSVTQNI GFRTIEYTCE EGFFLNGKHV
KLYGVCQHHD LGSLGAAINR TALRRQLTIL KEMGVNAIRT SHNMPAVELM ELADEMGFLI
NSEAFDIWER SKTTYDYARF FPKWADKDVA SWIRRDRNHP SLIMWSIGNE IYDTHADERG
QEVTRMLLSF VRKHDSRINA PVTIGSNYMA WENAQKCADI VKLAGYNYAE RLYGEHHELH
PDWMIYGSET ASTLQSRGIY HFPYSKAILA DDDEQCSSLG NTTSSWGARS TEYCITKDRD
ATFSAGQFIW TGWDYIGEPT PYFTKNSYFG QVDTAGFKKD TFYIYQAEWT DYKKSPMVHL
FPYWDFSKDQ VIDLRVCSNA PRVELFFNEN SLGTYDIDHK HGTQLCGHWQ LPYEEGTLKA
VAYDEYGNII ATDTRTSFGD AANIKLSPDK TTMLVNCQDL IFVEISMEDC NGNPVENANN
RVTVEVTGAG RLIGLDNGDS TDYDQYKGIS RRLFSGKLLA VIASTLTPGE ITMKVTSETL
PAKTLSFTSI PCEYPEGLSD NMRNTDHIIY PVLNPKVIIP TTDEAEIPIR KLEIVTPNGT
TLSKDLSTIE AYVITHPANA TYQDIDWRIT NGSGIDSNLA RLEKDGTKVK VIALGSGKAY
LRCTCRNGAD KVRMISEIEL NFHDLGEATM NPYEFIYGGL YSWSNTNLTN GIERGISSLL
PMDTYICFKN VDFGSYGSDE ITVPIYCLDT ELPTFEIWEG IPHEEGSELL ADCSFSKKPI
WNHHQPETYR LKRRVKGIVT ISFVVFKRLS VQGFQFTNPQ KGFAKLFATD CDLIYGDTFT
KKAPRIEGIG NNVSLEFSEM DFGEQGITKL SICGHSPIEK NTIHVKFISE EGSMLYNSIE
ELAEFTFTNE YEVKEFEFSK KTGKYTVTFI FLPGSNFDFE WFKFE
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