| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3044 |
|---|
| Symbol | |
|---|
| ID | 5743370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3721925 |
|---|
| End bp | 3723361 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641294145 |
|---|
| Product | amidophosphoribosyltransferase |
|---|
| Protein accession | YP_001560140 |
|---|
| Protein GI | 160881172 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
|---|
| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGATA GAATCAATGA TTTGATTTCA GAAGAAATCC ATGAAGAGTG CGGCGTTTTT
GGCGTCTATA ATATGGTTGG TGAAGATGTC GCTGATTCGA TTTATTACGG CCTTTTCGCC
CTACAGCATC GTGGACAGGA AAGCTGCGGT ATTGCGGTTA GTGATACCCT AGGACCTAAG
GGCAGGGTTT CCTCGATGAA GGGTATGGGG CTAGTGAATG AAGTTTTTAC TCCGGAAGGC
TTGGAGACAC TTCGTGGGGA CATCGGTGTT GGTCATGTTC GGTATTCCAC TGCGGGAGCA
AGTAATATTG CAAATACTCA GCCACTTGTA TTAAATTATG TAAAAGGTAC TTTGGCACTT
GCCCATAATG GGAATATTAT AAATGCACCT GAGTTAAGAA GAGAGTTAGA ATATACAGGA
GCAATCTTTC AAACAACGAT TGATTCTGAG GTTATTGCAT ATCATATAGC TAGGGAGCGA
TTAAAGACAG CAAATGTAGA AGGTGCTGTT AGGAATGCAA TGATGAAGAT TAAAGGTTCT
TATTCCCTGA TTGTAATGAG TCCAAGAAAA TTAATTGGGG CAAGAGATCC TTTTGGTTTT
CGACCTCTTT GTATCGGGAA GAAAGAGAAT ATGTATATTC TTGCGAGTGA GAGTTGTGCT
CTTGATGCAG TGAATGCAAC ATTTATTCGC GATGTTTTAC CAGGTGAAAT TGTAACGATT
ACAAAAGAAG GAATTTTATC GGATACATCG ATGTGCCAAC CAAAGATGGC TAAGTGTATT
TTTGAATATA TATATTTTGC AAGACCAGAT AGCAAGATTG ATAAGATCAG TGTTTATAAT
AGTAGAATTA TGGCTGGTCG TATCTTAGCG CAGGAGCATC CTGTGGAGGC TGATTTAGTG
GTGGGGGTTC CGGATTCCGG TAATGCTGCT GCAATGGGCT TTGCGATGGA AACAGGGATA
CCGTATGGCA TGGCATTTGT GAAGAATAGT TATGTTGGAC GAACCTTCAT TAAACCAAAG
CAAGCAATTC GTGAGTCTAG TGTACGAATT AAACTAAATG TACTCACAGA AGCAGTGAAA
GGCAAAAGAG TTGTTATGAT CGATGATTCA ATGGTACGTG GCACTACTTG CGCTCGAATT
GTCGGAATGT TAAAGGCAGC AGGGGCAACA GAGGTTCATG TTAGAATCAG CTCTCCTCCG
TTTTTATATC CATGTTATTT TGGTACCGAT GTGCCATCGG ACGATCAATT AATTGCGCAT
AATAATACGG TAGAACAGAT TTGTAAAATT ATCGATGCGG ATTCTTTAGG ATATTTATCA
GTAAATCGTC TTAGTGAATT AATTGATGGG GATTTGGGAT ATTGTGATGC TTGCTTTTCG
GGGCATTATC CAATTGAACC TCCGACGGAA GATATTCGTG GAGAATATGA ATTGTAA
|
|---|
| Protein sequence | MEDRINDLIS EEIHEECGVF GVYNMVGEDV ADSIYYGLFA LQHRGQESCG IAVSDTLGPK
GRVSSMKGMG LVNEVFTPEG LETLRGDIGV GHVRYSTAGA SNIANTQPLV LNYVKGTLAL
AHNGNIINAP ELRRELEYTG AIFQTTIDSE VIAYHIARER LKTANVEGAV RNAMMKIKGS
YSLIVMSPRK LIGARDPFGF RPLCIGKKEN MYILASESCA LDAVNATFIR DVLPGEIVTI
TKEGILSDTS MCQPKMAKCI FEYIYFARPD SKIDKISVYN SRIMAGRILA QEHPVEADLV
VGVPDSGNAA AMGFAMETGI PYGMAFVKNS YVGRTFIKPK QAIRESSVRI KLNVLTEAVK
GKRVVMIDDS MVRGTTCARI VGMLKAAGAT EVHVRISSPP FLYPCYFGTD VPSDDQLIAH
NNTVEQICKI IDADSLGYLS VNRLSELIDG DLGYCDACFS GHYPIEPPTE DIRGEYEL
|
|---|
| |