Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3019 |
Symbol | |
ID | 5743345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3686677 |
End bp | 3688038 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641294120 |
Product | MATE efflux family protein |
Protein accession | YP_001560115 |
Protein GI | 160881147 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000108454 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAT CAAACGCAAA AGATATGACG CAGGGAAGTC CAACCAAATT AATATTTTTC TTCTCTATCC CCTTACTGAT TGGAAATGTA GTCCAACAGC TTTATAGTAT GACAGACACG ATTATCGTTG GACAGTGTCT TGGCTCGAAT GCTTTGGCAG CGGTAGGAAC AACCGGACCG CTTAGCTTTT TAATTTTAGG TTTTGTGATT GGAATTACAA GTGGAATCGC GGTGATAGCT GCTCAACGTT TTGGAGCAAA AGATGAAGAA GGATTGAAGC GCTCCGTAGC TACTTCAATT ATACTTGGAA TTTCTATTAC GATTATTATA ACAGTATTAG CAGTTTTACT TGCAAAGCCT TTATTACTTC TTATAAATAC ACCAGAAACA ATTTTACAAG AGGCTTATGA CTACATTGTA GTAATCTTTC TTGGTGTGTT TGCTTGTATG CTCTATAATA TGATAGCATG CCTGCTTCGC GCAATTGGAG ATAGCAGGAC TCCACTTTAT TTTTTAGCAG TCTCTTCTAT TTTAAATATT GGGTTAGACT TTTTATTTAT TCTTACATTT GATATGGGGG TTGCAGGGGC GGCTTGGGCA ACTGTATTAT CCCAGTTTTT ATCTGGTCTT GCATGTGTAA TTTATGCATT TGTAAAATAT CCGATGCTTC GTGTATCCAA AAAAGATTTT CATTTGGATC TCAGATTTGC TTGGAAACAT TTGCAGATTG GATTACCTAT GGCATTTCAG TTCTCCATCA CAGCGATTGG TGTGATTATC TTACAAGGTG CACTAAATCT ATTTGGAGAA GATAAAATTG CGGCATTTAC CGCAGGGTCA AAAGTTGAGC AGTTGGTAAC ACAGCCAGCT GGAACCTTTG GTGTTACAAT GGCTAATTTT ACAGGACAAA ATTTAGGCGC GAATCGTTTG GATCGAATTA AAGTTGGGGT CAGAAAGTGT GCTATGCTAA CCCTTTCCTT TGCAGTATTG GCTATGATCT TATTGCAGAT TTTTTCAAAG CCACTGCTTT ATTTATTCGA TGTTGGAAAT AACCCAGTTA TAATGGATGC TGCATTGATG TATTTACGAT TATGCTCCAT CTTTTTCCCA TTCTTATTCC TGATATTTGT TTACCGAAAT GTGTTACAAG GAGTCGGAAG AAGTTTTATG CCATTAATGG CTGGTGTTTT TGAATTAGTA GCTCGTTCTG CAGCAGCATT TATATTACCA GGACTTATGG GATATGCAGG TATATGCTTG GCAGGACCTG CAGCTTGGGT AGCAGCGTCT ATTTTACTTT TTGTTTCTTA TCATATTGTA ATAAGGCAAG TAGAAAAACA ATATGCGGGG AAAACACGTT AA
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Protein sequence | MAKSNAKDMT QGSPTKLIFF FSIPLLIGNV VQQLYSMTDT IIVGQCLGSN ALAAVGTTGP LSFLILGFVI GITSGIAVIA AQRFGAKDEE GLKRSVATSI ILGISITIII TVLAVLLAKP LLLLINTPET ILQEAYDYIV VIFLGVFACM LYNMIACLLR AIGDSRTPLY FLAVSSILNI GLDFLFILTF DMGVAGAAWA TVLSQFLSGL ACVIYAFVKY PMLRVSKKDF HLDLRFAWKH LQIGLPMAFQ FSITAIGVII LQGALNLFGE DKIAAFTAGS KVEQLVTQPA GTFGVTMANF TGQNLGANRL DRIKVGVRKC AMLTLSFAVL AMILLQIFSK PLLYLFDVGN NPVIMDAALM YLRLCSIFFP FLFLIFVYRN VLQGVGRSFM PLMAGVFELV ARSAAAFILP GLMGYAGICL AGPAAWVAAS ILLFVSYHIV IRQVEKQYAG KTR
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