Gene Cphy_2906 details

Gene Information

• Locus tag: Cphy_2906
• ID: 5743966
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: -
• Start bp: 3565460
• End bp: 3565900
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 641294006
• Product: FeS cluster assembly scaffold protein NifU
• Protein accession: YP_001560003
• Protein GI: 160881035
• COG category: [C] Energy production and conversion
• COG ID: [COG0822] NifU homolog involved in Fe-S cluster formation
• TIGRFAM ID: [TIGR03419] FeS cluster assembly scaffold protein NifU, Clostridium type

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000274717
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATACAG AAAAAGTTAT GGATCATTTT CAACATCCTA GAAATGTTGG CGAATTAGAA 
AATGCGAGCG GTGTCGGAAC CGTTGGTAAT GCTAAGTGTG GAGATATCAT GAGAATGTAC 
CTTGATATTG ATGATAACCA AGTTATTCAA GATGTAAAAT TCAAAACTTT TGGTTGTGGC 
GCAGCAGTAG CAACAAGCAG TATGGCAACA GAATTAGTGA AGGGTCTTAC TGTACAAGAG 
GCTTTAACAG TAACAAATAA AGCAGTAATG GAGGCTCTTG ATGGTCTTCC AGCAGTTAAG 
GTACACTGTT CCTTATTGGC AGAGGAAGCA ATCCATGCAG CTCTTTGGGA TTATGCTGAA 
AAGAATGGTA TTCAAATTGA AGGTTTAAAA AAGCCAAAGA ATGACATTCA TGAAGAAGAG 
GAAGTAAACG AAGAGTATTA A 

 

Protein sequence

MYTEKVMDHF QHPRNVGELE NASGVGTVGN AKCGDIMRMY LDIDDNQVIQ DVKFKTFGCG 
AAVATSSMAT ELVKGLTVQE ALTVTNKAVM EALDGLPAVK VHCSLLAEEA IHAALWDYAE 
KNGIQIEGLK KPKNDIHEEE EVNEEY