| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2836 |
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| Symbol | |
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| ID | 5742152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3461725 |
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| End bp | 3463476 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641293928 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001559935 |
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| Protein GI | 160880967 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5373] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00147111 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCAAA AATCATGCAA TGGAATTATT CACACGATTA AGTCCGGTGA TACGTTATAC
AAATTAAGTG GATATTATAA GGTTCCACTG GAAGATATCA TTCATGCTAA TCCATATGTG
GATGCACACA ATCTTCAGAT CGGGGAGTAT ATCTGTGTTC CTAATGCAAA CACTGGAACA
CCATCGCCGG CAGCTCCAAC GCCAACAACA CCGATGACAC CAAGAACACC AACGCCAACA
AACCCGATGA CACCAACAAC CCCAACAACA CCGATGACAC CAAGAACACC AACGCCAACA
AACCCGATGG TACCAACGAC ACCAATGTCA ACGTCGCAGT CTTTTACTGA TCCATCAGCA
TCGTTGGCGT ATTCTTCATC TGGAAAACGT GTTACTCCTA TGCCTGCCAT CCCAAAGTCA
TCAACGCCAA GTAGAGCCCC GGAGAAGCCA GCTACATGTG AAGGTATGTT TCATGAGATT
AGGCCTGGTG ACACATTTTA TAAGTTAAGT TTGCAATATA ATGTTTCGAT GGATGCGATT
ATTCGTGCAA ATCCATATGT AGACGCATAT AACCTTCAAA TTGGACAGCG TGTATGTATT
CCAGGTGCTT CAGCTCCAGT TAAACCTTCG GTACCGCCAG TTAAACCAGT ACCACCAGTA
ATGCCTCCAG TAGCACCGGT ACAACCAAGA CCGGTACCAT CGAAGCCAGC ACCATCGAGA
CCAGCACCAC CAAAGCCAGC ACCACCAAAG CCAGCACCAC CAAAGCCAGT ACCACCTAAA
CCAGCACCAC CAAAACCTGT ACTACCAAAA CCAATACCAC CAGTGATGCC TCCAGCACCA
CCATGTGAAG ATGGTATGTT ATATACGATA CAACCTGGCG ATACGCTTTA TAAGTTAAGC
TTAGAATTTA AAGTTCCGCT AGCTCTCATT ATGCGTGCAA ACCCTAATAT TGATGTTTAT
AATTTACAGG TTGGTCAGGA AATTTGTATC CCTAGAATTC CTGAAGAGGT TCCAGTGCCA
CCAGCACCAC CAGTGAGACC AGTGCCACCA GTGAGACCAA CTCCACCTAT AGCACCAATA
CCACCAGTAA TGCCACCGGT GCAGCCGTTA CCACCAGTAT CCCCAGCACC ACCAGCACCA
CCGGTGATAC CACCTCCGAT TCCTACTCCA GTACCTCCAA GACCAATCAT TCCACCGGTG
CAACCAGCAC CACAACCGGT ACCTCCGGCT CCAAGACCTG AAAGACCACA AAGACCTCCT
CTTCGCCCTA TTTTCCCAAT TATCAAGGAA GAGAATACTA ACAATAACAA TATTGTTATA
ATACCAATTA TACCTGAGAG ACCAGAGGTT GCACCAGTCT GTCCAACTTG TCCAGTCTGT
CCAACGTGCC CAGTATGCCC AACGTGCCCA ACGTGCCCAG AGTGTCCAAC GTGCCCAGAG
TGTGAAGTTC CAATTTGTCC AGTAGAACCA GAATGTGAAG TAGCTCCAGT CTGCCCAGTA
GAACCAGAAT ATGAAGAAGT ACCAACCTGC CCAGCGTGCC CAGAAAAGCC TGTTTGCGAA
GCTCCGAGAA GAAGGAATAC TATGATGTAT ACGGTAAAAG AATGCGAAAC ACTTGGAGAT
ATTCTTGACT GTTTTGACAT GACTTTAGAT GAGTTCTTCT CGCTCAATGA TGTATGTGAT
GTATGTTTAA AACCATGTTC AAAGGTTTGC GTATGTCAAA AGCAACAGGG ACCTTGGAGA
AGATTCTACT AA
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| Protein sequence | MDQKSCNGII HTIKSGDTLY KLSGYYKVPL EDIIHANPYV DAHNLQIGEY ICVPNANTGT
PSPAAPTPTT PMTPRTPTPT NPMTPTTPTT PMTPRTPTPT NPMVPTTPMS TSQSFTDPSA
SLAYSSSGKR VTPMPAIPKS STPSRAPEKP ATCEGMFHEI RPGDTFYKLS LQYNVSMDAI
IRANPYVDAY NLQIGQRVCI PGASAPVKPS VPPVKPVPPV MPPVAPVQPR PVPSKPAPSR
PAPPKPAPPK PAPPKPVPPK PAPPKPVLPK PIPPVMPPAP PCEDGMLYTI QPGDTLYKLS
LEFKVPLALI MRANPNIDVY NLQVGQEICI PRIPEEVPVP PAPPVRPVPP VRPTPPIAPI
PPVMPPVQPL PPVSPAPPAP PVIPPPIPTP VPPRPIIPPV QPAPQPVPPA PRPERPQRPP
LRPIFPIIKE ENTNNNNIVI IPIIPERPEV APVCPTCPVC PTCPVCPTCP TCPECPTCPE
CEVPICPVEP ECEVAPVCPV EPEYEEVPTC PACPEKPVCE APRRRNTMMY TVKECETLGD
ILDCFDMTLD EFFSLNDVCD VCLKPCSKVC VCQKQQGPWR RFY
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