Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2738 |
Symbol | |
ID | 5742053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3331208 |
End bp | 3332038 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641293830 |
Product | 5-keto-4-deoxyuronate isomerase |
Protein accession | YP_001559838 |
Protein GI | 160880870 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3717] 5-keto 4-deoxyuronate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.171059 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACTTA GAACAGCAGC ATCTCCAAAG GATGTAAAAC ATTACACAAC AGATCGTCTT CGCGAAGAAT TTTTAATTGA TGATTTATTT AAAGTAAATG AAATTAAACT TGTTTACAGT CACATTGACC GTATTATTAC AGGTTCCGCT GTACCAGTTA ATCAGGAGTT AAAATTAACC GCTGGTGATG AATTACGTGC AGAATATTTC CTTCAAAGAA GAGAGATGGG AATCATTAAT ATCGGTGGAA AAGGTACTAT TACAATCGAT GGTACCGTAT ATGAGTTAGA GTATAAAGAT GGTATGTACA TTGGTATGGG AGCAAAAGAT ATTTCTTTTG CAAGTGTGGA TGCAACAAAT CCTGCAAAAT TCTATATCAA CAGCGCACCA GCTCATACTT CTTATCCAAC CGTATTAATT AAACCAGAAA ATTGTGTTAA TGTGGAACTT GGATCCTTAG AAGGCTCCAA TCACCGTGTT ATCTGTAAGT ACATTCTTCC AGGTCAGGTA GAGAGTTGTC AGCTTGTAAT GGGTATGACA CAGTTAAAGC CGGGTAGTGT ATGGAATACA ATGCCTTGCC ACACTCATGA TCGTAGAATG GAAGTTTATT TATATTTTGA TATGCAAGAA AATGATATGG TATTCCATTA CATGGGTGAG CCAACAGAAA CAAGACATAT CATTATGAGA AACGAGCAAG CTGTTATTTC TCCAAGCTGG TCTATCCATT CTGGTTGTGG TACAAAAGCC TATACCTTTA TCTGGGGTAT GGTTGGTGAA AATCAAGATT TCGATGACAT GGATGCTTGT GATTTGAAAG ACTTAAGATA A
|
Protein sequence | MELRTAASPK DVKHYTTDRL REEFLIDDLF KVNEIKLVYS HIDRIITGSA VPVNQELKLT AGDELRAEYF LQRREMGIIN IGGKGTITID GTVYELEYKD GMYIGMGAKD ISFASVDATN PAKFYINSAP AHTSYPTVLI KPENCVNVEL GSLEGSNHRV ICKYILPGQV ESCQLVMGMT QLKPGSVWNT MPCHTHDRRM EVYLYFDMQE NDMVFHYMGE PTETRHIIMR NEQAVISPSW SIHSGCGTKA YTFIWGMVGE NQDFDDMDAC DLKDLR
|
| |