Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2667 |
Symbol | |
ID | 5742834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 3256913 |
End bp | 3257491 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641293759 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001559767 |
Protein GI | 160880799 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000274018 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAAAG GATTCGCTGA GGAAGAGAAA AAAGTAATTA CAGAAAAACT GATGAACGAA TGTAAATCGA GTTGGCAGAA ATATGGCTAC AAGAAAACTA GTATCGATAC TCTTTGTAAT GATGTTGGTA TTTCTAAAGG GTCCTTTTAC AATTTTTTTG ATACAAAAGA GGCACTCTTT TATCAAGTTA TCAAAGACAC GCAAAAACAA CTTTATGACA TTGTGGAAGA ACGAATATCA CAAAATCAGA GCAAATACGG TATTGCAGAA GCATTAAAAG AAATCTATCT GGAATACAGC AAAAGTAGTT TCATGTATGA CACGAAGAAT CCCGATTTTT TAAGTTTCTT TCATAAGCTA AGTGAACAAC AACGCCAAGA ATTAAACGAA AAAAGTTATA TTAGCACAAA ATATATGCTT CACAAGCCAT TCCTCTCCTT AAAAATTGAT GAAGATTTAG CTATTTCTCT TTTAATGGCA ATGCTATCTA GTATTTCTCA AAAAGATAAT ATGCTTTGTG ACGCAACAAA AGTTTTTGAT TTTATGATTG ATCGTTTAAT TGATGATATA TTTGATTAG
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Protein sequence | MPKGFAEEEK KVITEKLMNE CKSSWQKYGY KKTSIDTLCN DVGISKGSFY NFFDTKEALF YQVIKDTQKQ LYDIVEERIS QNQSKYGIAE ALKEIYLEYS KSSFMYDTKN PDFLSFFHKL SEQQRQELNE KSYISTKYML HKPFLSLKID EDLAISLLMA MLSSISQKDN MLCDATKVFD FMIDRLIDDI FD
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