Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2612 |
Symbol | |
ID | 5742777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3191676 |
End bp | 3192914 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641293702 |
Product | putative stage IV sporulation YqfD |
Protein accession | YP_001559712 |
Protein GI | 160880744 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02876] sporulation protein YqfD |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGCAG GTGGTTCCCC AGAGCATTTG ATAAACTTAT GCAGCGGGAA GGGCATTGTT TTATGGGGCT TAAGTTACGG AGAAAGTAAA AATAAAAAGC AATTAAATGA AGAAGATGTC ATCTATTGCT ATATACTATT AAAAGACTAT CGTAAGTTAA GACCACTGGT ACGAAAGGCG AAAGCAGTGC CCTACATAAA AGAACGACAT GGTTTACCTT TCTTTTTAAG ACATGTTATA CGACGCAAAA TATATTATAT AGGTATACTA CTTTTTTGCG CTTTGGTATA TAGCATGTCT CTTTATATTT GGGACATTAG TATTGAAGGA GGATATAAGC ATACAGAAGA ACAACTGATG GAGTATTTAC AAACAACTGG AGTATACAGC GGTGTAAAGA TTAAGTCAAT TGAATGTCCG AGGATCGAAG AAAATATCCG TAGGGACTTT TCAGATATCG GCTGGGTGTC GGCGGAGATT AAAGGAACAA GATTGATTGT TCGTATCGTT GAGACAGTAC TTCCAAAATT AAATTCTGAA ACAAAAAAAA CTTCGTTAAG TACAGCGGAC CTGGTCGCTA CGAAAGATGG AATTGTGAAT TATATCATAG TTCGTAGTGG TACACCAAAA GTGGAACTTG GCAGTGTTGT AAAAAAAGGC GATATCCTAA TTTCTGGTGT AGTTCCAGTA ATTAGAGATG GGGAAACCTT GGTTGAAAAT AAAACAGTGT TAGCGGATGG AGATATTAGT CTACGTACAT ATTTTGAGTA TGAAGATTCC TTTCCTTTAA AATATACTTA TCCGGTGTAT ACGAATCATA AAAAAAATGG TTATTCCATT ACCTTGTTCG GTAAAAAAAT ATTTTCCCAT ATGCCTAGAA ATTCCTATAC TAACTATGAT ATAATTACGG AAGCTAGTAC CTTAAAATTA GTAAGGAATT TTTATCTTCC AATTAGTTTT ATGAAAACCA CGATTTCTGA GTACAATATA GAAGAAGCAA TCTTTTCGGA AACAGAAGCG ACCACATTAG CAAATAAGCG ACTGCTTCGT TATTTAGAAA AATTGACTAA CCAAGGTGTT ATTATTTTAG AACAGAGAGT AGAGGTAAAA GTGGAAAACG GTACATGCAA AAGTGCAGGT AAAATTGTTG TGGAAGAGCC TGCGTGGGAT TATAGCCCAA TCAATGACAG CGAGTGGAGG GTGTTAGAAT CGGATGAGCA TAGTGGAGAC AATAATTAA
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Protein sequence | MMAGGSPEHL INLCSGKGIV LWGLSYGESK NKKQLNEEDV IYCYILLKDY RKLRPLVRKA KAVPYIKERH GLPFFLRHVI RRKIYYIGIL LFCALVYSMS LYIWDISIEG GYKHTEEQLM EYLQTTGVYS GVKIKSIECP RIEENIRRDF SDIGWVSAEI KGTRLIVRIV ETVLPKLNSE TKKTSLSTAD LVATKDGIVN YIIVRSGTPK VELGSVVKKG DILISGVVPV IRDGETLVEN KTVLADGDIS LRTYFEYEDS FPLKYTYPVY TNHKKNGYSI TLFGKKIFSH MPRNSYTNYD IITEASTLKL VRNFYLPISF MKTTISEYNI EEAIFSETEA TTLANKRLLR YLEKLTNQGV IILEQRVEVK VENGTCKSAG KIVVEEPAWD YSPINDSEWR VLESDEHSGD NN
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