| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2320 |
|---|
| Symbol | |
|---|
| ID | 5745379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 2859612 |
|---|
| End bp | 2860511 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641293410 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001559420 |
|---|
| Protein GI | 160880452 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000441475 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAT TTAAAAATGT TTCAAAGCGC TTTGGCAGCG ATTTATCACT CGATCAGATT
AGCTTAACAA TTGAGGATGG TACTGCATTT GGATTATTAG GATCGAATGG TGCTGGTAAG
TCCACACTCT TGCGCTTGCT TAGTGGTATC TATAAAGCAG ACGAAGGAGA AGTCCTTATC
GACGAAGCTT CTGTTTATGA TAATATACAA GTAAAGTCAG ATATGTTCTT TATAAATGAT
GAAACTGTGC AATACCAAAA CATGACTATA GTTGAATTAA AAAATCACTA CAAGATATAT
TATAGAAATT TTAATGAGGA AGTATTTAAA CGTTTAATAG ACGTAACAAA ATTACCAACA
GATAAAAAAA TGTCGACATT TTCAAAGGGT ATGAAAAGAC AGGCAGTTTT TATTATTGGA
CTTTCTTCCG GTACGAAATA TCTATTAATG GATGAAGCGT TTGATGGATT AGATCCTGCA
ATGAGAATTA TTGTGAAGCG TATCTTAGTA GATGAAATGC TCGATCGTAA ACTCACATTA
ATACTCTCCT CCCATAACTT GAAGGAGGTA AATGATATTT GTGATCATGT AGCGCTACTT
CATGAAGGCA AGCTTCTCTT TAGCAAAGAT TTGGAAAGTG TATATGAAAG ATTTCATAAA
ATTCAGGTGG CATTTTCAAG GGATTACTCT GTGGAAGATT TTGAAGGATT GTCTATCGTT
CAAAGTGAAA AGATTGGAAG TGTGTTAACC ATGGGGGTAC GTGGTGATAT CGAAGAAATT
AAGACATATT TATCTCACTT TCGTCCGATC CTACTAGAGG AAATTCCACT AACACTAGAA
GAAATATTTA TCTATGAAAT GGAGGCAAAC GGATATGACG CAAACGGCAT CGATCACTAG
|
|---|
| Protein sequence | MIEFKNVSKR FGSDLSLDQI SLTIEDGTAF GLLGSNGAGK STLLRLLSGI YKADEGEVLI
DEASVYDNIQ VKSDMFFIND ETVQYQNMTI VELKNHYKIY YRNFNEEVFK RLIDVTKLPT
DKKMSTFSKG MKRQAVFIIG LSSGTKYLLM DEAFDGLDPA MRIIVKRILV DEMLDRKLTL
ILSSHNLKEV NDICDHVALL HEGKLLFSKD LESVYERFHK IQVAFSRDYS VEDFEGLSIV
QSEKIGSVLT MGVRGDIEEI KTYLSHFRPI LLEEIPLTLE EIFIYEMEAN GYDANGIDH
|
|---|
| |