Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2230 |
Symbol | |
ID | 5744541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 2751170 |
End bp | 2752021 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641293324 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001559334 |
Protein GI | 160880366 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCACAAT ATGACCAATA TAAAAATAGA AGCGTAGATA TTGAATTTGC AGCAGTCGAA GATTTTGAAA ATCTTCCTTA TCCAGAACGG TTTACTCTGA TATTTATTAC AAATGGGATT ATAAAGGCGC AGTTGAATGA ACGACCAATA GAAATTTCTG CCCCTGGCGT TCTATGCTTG TCTATGGATG ATAAACTGCA AGTTATCAAC AAGGATAATA TCTCCGCACA ATCCTTTAGT TTTCATCCCG ATTTTTTCAA AACATCCCGA ATTTTTGAAA CACAAACATA CAAGCCAAGC AACTTAAAGA TACAAGTCGG TCTTTCACTT TTTCAAAGGG ACAATTCCCA AACTGGTATA CTTCATATAA CTAGCAAAGC ATTTCCTCAA CTGTTTGAAT GGTTTTTTAT ACTGGGAACA GAAGTGTATG CACATAGTAA TGCACTTTGG GTATGCAGAA TTAAAAAATA TCTTATACAG ATTTTAAGGC TACTTGAGGA CTTAAACCAT CAAATCGAGC AATCTCCTAT TGATTTGGCT TTAGATTATA TACACACAAA CTATCCGGGC AAAGTCACAT TGGAAGATTT AACGAATTGT GCACATTTGA ATCGTATATC GCTCAATGAA ATGTTCCAAA AAAGATGTGG GTGTACCGCT ATGGGATATC TACTATCATA TCGGTTAAAG GTTGCAGGGG ATCTTCTCGT TCATACAGAT ATGACCTTAG ATGAAATTGC CCGTTCCATC GGATTTCAGT ATGATACTTA CTTTATAAAA CAATTTACAG CCAAAAGAGA AATGTCACCC ACAGCATTTC GGAACACTCA TCGAAATCTT CAGCATTATT AA
|
Protein sequence | MPQYDQYKNR SVDIEFAAVE DFENLPYPER FTLIFITNGI IKAQLNERPI EISAPGVLCL SMDDKLQVIN KDNISAQSFS FHPDFFKTSR IFETQTYKPS NLKIQVGLSL FQRDNSQTGI LHITSKAFPQ LFEWFFILGT EVYAHSNALW VCRIKKYLIQ ILRLLEDLNH QIEQSPIDLA LDYIHTNYPG KVTLEDLTNC AHLNRISLNE MFQKRCGCTA MGYLLSYRLK VAGDLLVHTD MTLDEIARSI GFQYDTYFIK QFTAKREMSP TAFRNTHRNL QHY
|
| |