Gene Cphy_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1988 
Symbol 
ID5744668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2455089 
End bp2456153 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content32% 
IMG OID641293085 
Producthypothetical protein 
Protein accessionYP_001559095 
Protein GI160880127 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAATA AAAAGAAGAA AAGAAAAATT ATTATAGCAA TATCTATTAC TTTGATTGTA 
TTGTTAGTAA TAGTACCCTT GGGAATTTCA ACTTATATCT ATCAGTCTAA CTTTGGTGGT
AGATTCGAAA CAATCTCTTG GATGGCACGC AATCTTGATG AATTTGATGG TTTAGAATCA
AAAAAGTATA CTTTTGAATC AAATAATGGT CAACATCTGG TAGGCTATAA ATATTATAAG
AAGATTGATC ATGTAAAAGG AATAGTAGTT ATTTCACATG GACTTGGCGG TGGCGGACAC
AACTCATATA TGGATGTTGC GGATTACCTC GCAACTAATG GATATATTAT TTTTGCGTAT
GATGCTACTG GTAATGATGA GAGTGAGGGT GATGCTGTAG AAGGTATCCC TCAAGGTTTG
ATAGATCTCG ATTATGCTAT CCGTTTTATA AAAGATAATG ATGAATTTAA CAGCTTGCCA
ATTATGTTAT TGGGACACAG CTGGGGCGCT TATTCTGTTG GGAGTGTTTT AAATATTCAT
CCTGATGTAA AAGCAGTTGT TATGATTTCA GGTTTTAATA AGTCAACTGA TATCATCGCG
GAAGAAGGTA AACGGATCAT GGGCATTGGT ATAAATCTAT TAATGCCATA TGTCTCCATG
ATTGAACATG TTAAGTTCGG AACATATTCT TCATACAATT GTATAGATGG TTTTGAGACC
TCAGACGCTG GTGTAATGAT AGTTCACAGC TACGATGATG AAATGGTTTC CTATGAAAAA
CAGTACAAAA GATTTTGGAA TACATATCAA AACAATCCAC GTTTTACGTT TGTTCCATAT
GAAAATCGAG GACATAATTA TATATATTAT TCAGATATTT CAAAAGATTA TAGAAATAAA
TTAAATAATC AATTTTCTGA ATTTGTTAGT TCTCTGGATA CGGAACTGAC CGCAGAGATT
AAAACAAAAT ATATGAATGA GAATCTCAAT AAAACCATTT TGTTTGATTT GGACAAAGAT
CTGATGAACA GAATAGTAGC ATTTTATGAT AACTATACAA AATGA
 
Protein sequence
MINKKKKRKI IIAISITLIV LLVIVPLGIS TYIYQSNFGG RFETISWMAR NLDEFDGLES 
KKYTFESNNG QHLVGYKYYK KIDHVKGIVV ISHGLGGGGH NSYMDVADYL ATNGYIIFAY
DATGNDESEG DAVEGIPQGL IDLDYAIRFI KDNDEFNSLP IMLLGHSWGA YSVGSVLNIH
PDVKAVVMIS GFNKSTDIIA EEGKRIMGIG INLLMPYVSM IEHVKFGTYS SYNCIDGFET
SDAGVMIVHS YDDEMVSYEK QYKRFWNTYQ NNPRFTFVPY ENRGHNYIYY SDISKDYRNK
LNNQFSEFVS SLDTELTAEI KTKYMNENLN KTILFDLDKD LMNRIVAFYD NYTK