Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1977 |
Symbol | |
ID | 5744657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 2441154 |
End bp | 2441819 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641293074 |
Product | ABC transporter related |
Protein accession | YP_001559084 |
Protein GI | 160880116 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00231663 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATTT TAGAGCTTAA AAATGTTTGC TACAAATATG AGGGAACAAG TAAAAATGTT TTATCAAATA TCAATCTCAG CTTTGAACAA GGAAATCTAT ATGCAATTAT GGGAAAATCG GGTTCTGGAA AGACCACTCT ACTATCCATA ATTTCAGGAT TAGATTTAGC CACAAGCGGT GAGGTTTTAT GGAATGGAAA AAGTTTAAAA GAAATCAATC GTGATGACTA TAGAGCAAAA GGAATAGGGG TTATTTTTCA AGGTTATAAC CTTTTAACAA ATGCAACTGT ACTTGAAAAC ATCATACTTT CCATGAACAT TAGCGAAAGT AAAGAAAAAA ATAAAAAGCA ATTTGCACTT GATATTCTAT CCAGAGTTTC TATAGATGAA GAAAAAGCAA ACCGTAAAAC TTTAAAGCTT AGTGGTGGTG AACAACAACG TGTAGGTATT GCAAGAGCTT TGTCACACGA TCCAGATATT ATTATTGCTG ATGAACCAAC CGGAAATTTG GACACAGATA CCGAAGAAAG CATTATGGAG ATTTTAAAAG ATCTTGCCCA TAACCAAAAT AAATGCGTTA TTGTTGTAAC TCATTCCAAA AATGTTGCGA CCTACGCAGA TGAAGTTTTG GGTCTATCAC ATGGGAATTT AGTAAATGAT AAGTAG
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Protein sequence | MSILELKNVC YKYEGTSKNV LSNINLSFEQ GNLYAIMGKS GSGKTTLLSI ISGLDLATSG EVLWNGKSLK EINRDDYRAK GIGVIFQGYN LLTNATVLEN IILSMNISES KEKNKKQFAL DILSRVSIDE EKANRKTLKL SGGEQQRVGI ARALSHDPDI IIADEPTGNL DTDTEESIME ILKDLAHNQN KCVIVVTHSK NVATYADEVL GLSHGNLVND K
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