| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1973 |
|---|
| Symbol | |
|---|
| ID | 5744653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 2434856 |
|---|
| End bp | 2435425 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 641293070 |
|---|
| Product | ThiJ/PfpI domain-containing protein |
|---|
| Protein accession | YP_001559080 |
|---|
| Protein GI | 160880112 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00863935 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAAG TATTATGTTA TATTTATGAT GGAATGGCAG ACTTTGAAAT AAGCTTATTA
CTTCACCGAT TAAAAAATAC TGGTAAGAAA GAGATTATAT CAATTTCAGA AAATGTTGAA
GCAATTGTGG CTCAATCGGG ACTTAGATAT ATTCCAGATA TGAAAATTGA TGATATTAGA
TGTATAGAAG ATGTTGAAGC CTTAATAATT CCGGGAGGCC CAATTGATAA TAATCAAAAT
TGCATCTGTA AACTTGCTAA TGATATTATA AATAGTGGTA AACTGTTAGC AGCAATTTGT
TTTGGTCCAC AATTTTTTGG ACGTGCTGGA ATACTTGATA ATTATATATA CACAACTTCA
TGTTCAGTAG AAAAAATCAA ACAACTGGAA TGTGAAGATC CATTCAATCG TGAAAAATAT
GTACATAAGA GAACAGTTGT AGATCGAAAT CTTATAACTG CACAGGGATA TGCGTTTGTG
GATTTTGCTA TGGAGGTATG TAAATATATG AAAATATTTG AGAGTGAACA AGAAGCATAT
GAACAAATAG GACGAGTAAA AGAAGAATAA
|
|---|
| Protein sequence | MRKVLCYIYD GMADFEISLL LHRLKNTGKK EIISISENVE AIVAQSGLRY IPDMKIDDIR
CIEDVEALII PGGPIDNNQN CICKLANDII NSGKLLAAIC FGPQFFGRAG ILDNYIYTTS
CSVEKIKQLE CEDPFNREKY VHKRTVVDRN LITAQGYAFV DFAMEVCKYM KIFESEQEAY
EQIGRVKEE
|
|---|
| |