Gene Cphy_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1956 
Symbol 
ID5744635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2413339 
End bp2414268 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content33% 
IMG OID641293052 
Producthypothetical protein 
Protein accessionYP_001559063 
Protein GI160880095 
COG category[R] General function prediction only 
COG ID[COG5401] Spore germination protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.173181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT ATTGCTTTTG GTTTGTCCTT TGCCTATCCT TACTCCTTAT TGGATGTCAT 
AAGAAAGTGA ATGAACCAGT TGCTGGAACA AAATTATATT ATATAAATAA GGATGAAACA
GCAATTGTGT CAGAATCTTA TGATTTGAAA AGTACAGATA GAAAGGGGCA GATTGAGGAG
TTTTTAAAAG CGTTAAGTAT TGAACCCCAA AATTCGGATT ATAAACTTGC AAAACCAAAA
GATATTACAT TACTTGGTTA TAACTTTGGT GGAGCAGGGC AGTTACAATT AGGGTTTGAT
ATTAATTATA AAAATGTTAC TGGTATTTCT GAAGTATTGA TGAGGGCAGC AATCGTAAAG
ACATTTACTC AAATTGAAGG GATTACTTAT GTCGAATTCT TAGTGAATGG ACTTCCTTTG
GTGTTAGATG ATGGAAGCTG GGTTGATATG ATGAGTGCAG ACCATTTCAT TGATAATGTA
GGAGATTTTA CCTCATATTC ACAAGTAGAT CAAGTATCTC TCTTTTATGC AAATGAAACA
GGGGATGGAT TATTAGAATC GGTTCGTAGA ATTGAATATG ACGGAAGCAT ACCAATCGAG
CAGATTATCG TAGAACAATT GATTGCAGGT CCGATTGATG TCGAACTTCA AGCAGGAATG
CAGGCAACAA TTCCACAAAA TACTGTGCTT AATAAAATAA GCAAGAAAGA TGGAATATGT
ACTGTAGATT TAAGTTCTGA ATTTTTGAAT AAACTGCCAA AAGTCACAGA AGCTACTACG
ATTTACTCTA TAGTTAATAC ACTTATTAGT GAAGAAAATA TAGATAGGGT ACAATTTCTG
ATTAACGGTG AAGTAACCAA TCTATATCGA AAGATTGCGA TTGATCAACC ACTAGAACGT
AATCTTGATA TTATTAAGAG TGAGAAATAA
 
Protein sequence
MKKYCFWFVL CLSLLLIGCH KKVNEPVAGT KLYYINKDET AIVSESYDLK STDRKGQIEE 
FLKALSIEPQ NSDYKLAKPK DITLLGYNFG GAGQLQLGFD INYKNVTGIS EVLMRAAIVK
TFTQIEGITY VEFLVNGLPL VLDDGSWVDM MSADHFIDNV GDFTSYSQVD QVSLFYANET
GDGLLESVRR IEYDGSIPIE QIIVEQLIAG PIDVELQAGM QATIPQNTVL NKISKKDGIC
TVDLSSEFLN KLPKVTEATT IYSIVNTLIS EENIDRVQFL INGEVTNLYR KIAIDQPLER
NLDIIKSEK