Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1956 |
Symbol | |
ID | 5744635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 2413339 |
End bp | 2414268 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641293052 |
Product | hypothetical protein |
Protein accession | YP_001559063 |
Protein GI | 160880095 |
COG category | [R] General function prediction only |
COG ID | [COG5401] Spore germination protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.173181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT ATTGCTTTTG GTTTGTCCTT TGCCTATCCT TACTCCTTAT TGGATGTCAT AAGAAAGTGA ATGAACCAGT TGCTGGAACA AAATTATATT ATATAAATAA GGATGAAACA GCAATTGTGT CAGAATCTTA TGATTTGAAA AGTACAGATA GAAAGGGGCA GATTGAGGAG TTTTTAAAAG CGTTAAGTAT TGAACCCCAA AATTCGGATT ATAAACTTGC AAAACCAAAA GATATTACAT TACTTGGTTA TAACTTTGGT GGAGCAGGGC AGTTACAATT AGGGTTTGAT ATTAATTATA AAAATGTTAC TGGTATTTCT GAAGTATTGA TGAGGGCAGC AATCGTAAAG ACATTTACTC AAATTGAAGG GATTACTTAT GTCGAATTCT TAGTGAATGG ACTTCCTTTG GTGTTAGATG ATGGAAGCTG GGTTGATATG ATGAGTGCAG ACCATTTCAT TGATAATGTA GGAGATTTTA CCTCATATTC ACAAGTAGAT CAAGTATCTC TCTTTTATGC AAATGAAACA GGGGATGGAT TATTAGAATC GGTTCGTAGA ATTGAATATG ACGGAAGCAT ACCAATCGAG CAGATTATCG TAGAACAATT GATTGCAGGT CCGATTGATG TCGAACTTCA AGCAGGAATG CAGGCAACAA TTCCACAAAA TACTGTGCTT AATAAAATAA GCAAGAAAGA TGGAATATGT ACTGTAGATT TAAGTTCTGA ATTTTTGAAT AAACTGCCAA AAGTCACAGA AGCTACTACG ATTTACTCTA TAGTTAATAC ACTTATTAGT GAAGAAAATA TAGATAGGGT ACAATTTCTG ATTAACGGTG AAGTAACCAA TCTATATCGA AAGATTGCGA TTGATCAACC ACTAGAACGT AATCTTGATA TTATTAAGAG TGAGAAATAA
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Protein sequence | MKKYCFWFVL CLSLLLIGCH KKVNEPVAGT KLYYINKDET AIVSESYDLK STDRKGQIEE FLKALSIEPQ NSDYKLAKPK DITLLGYNFG GAGQLQLGFD INYKNVTGIS EVLMRAAIVK TFTQIEGITY VEFLVNGLPL VLDDGSWVDM MSADHFIDNV GDFTSYSQVD QVSLFYANET GDGLLESVRR IEYDGSIPIE QIIVEQLIAG PIDVELQAGM QATIPQNTVL NKISKKDGIC TVDLSSEFLN KLPKVTEATT IYSIVNTLIS EENIDRVQFL INGEVTNLYR KIAIDQPLER NLDIIKSEK
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