Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1943 |
Symbol | |
ID | 5744622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 2400010 |
End bp | 2401404 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641293039 |
Product | chitinase |
Protein accession | YP_001559050 |
Protein GI | 160880082 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0117537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAA AATTGCAACG AATTCTTTGT TTTTCTCTGT TACTGTTTAT CATTTTTCCT TCAATCTCTA TTTATGCGGC AGATAAAACA CCTTTGTATA ATTCTATAGC ACTCAGTGAA AAAACTGAGC CGCCATATCC TTTTTGGAAA GATTACATGA ATTATTCACA AAGTGGTACA AAAGTATATT ACATAGGTAA AATTTATCAA AATAAATGGT ATGCTAATGC TGGACAAAAG CCAAATGCCG GTGACCCTTG GGCTTTAGTA GGTGATGCAG AATGGACCGT TCCTGAGGAC GAAAAGAATT ATCAAAAACA AGAAAGTTCA GTTTCAATAA ACAAAATATT GACGGATTCT GAAATTCTTT CCTTATATGG GGGTATCAAC CCAGAGTATT CACCTGAAAA GGCACTTAAC AGACTAAACC AACTTATACA AGAGACAGCT TATAATGAGC TTTTCCCATA CCGCTTCGGC TCTCCATTAT GGAAAACTTG TTCTGCAACT GCACAGTACT ATCCTAACAC CTCTAATATT CCAGATTATT ATTCTTACAA TAATCTAAAG GAAGCCTTAA AAACTTTGGC AAATACCATT GTTAAGGTTC AATGGTATGA AGGATCCGAA TGGTGTTACC GTATTATTCG TTTGGATAAG ACTACAAAAG AACAAAAGCT TACTTATTCC GATCCTAATT TTGATGCTGA ATGGCTTCAA TCAAAGCCTC TTCAAACTAA AATATGTGAC TATGGCTCCT TTCTGGCTGT AGGTAATAAC AATACTCAAA AAAGAGAGTT GGCAGGATTT TTAGCGAATA TCTCTCATGA AACCGGTGGC GGTACGATCG GTGGTGAAGT GTCAAATGAT TCTTTGACCG GACTCTACTT TAATGAAGAG GTAGGTTTTA TTGGTTCAAC TGCTATCGGT TATGTGCAAA GCACCGGAAC TAATTACCTC CCAGTAGCCG GAAAGAGTTA TCATGGCAGA GGACCAATTC AATTATCTTA TAATTATAAC TATGGTCTTT GCTCTGATGT TATTTTAGGA GATAGCTCAA TACTTCTAAA AAACCCTGAG TTACTTACAA GTAATGGTGT AATGGGCTTT ATGACCGGTA TATGGTTCTG GATGACACCA CAACCTCCAA AACCTTCTTG CCACGAAGTA ATCAGTGGAA TCTGGCAACC GAAACCAGGT AGTCCAAATG CTCAATATAA CGGTAATTTT GGATTAACCA TTGTTATAAT CAACAATGAG TCAGGACAGT CAGAAAACGG AACTGGAGCA GTTGCTCGCC GAGCAAGATA TTATAGAATT TTTACTCAGA AGATGAATGC TAATATTCAA GGAGAGCAAT GTGATACGGT TGGCATGACA ACCTTTGTAC AATAA
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Protein sequence | MKLKLQRILC FSLLLFIIFP SISIYAADKT PLYNSIALSE KTEPPYPFWK DYMNYSQSGT KVYYIGKIYQ NKWYANAGQK PNAGDPWALV GDAEWTVPED EKNYQKQESS VSINKILTDS EILSLYGGIN PEYSPEKALN RLNQLIQETA YNELFPYRFG SPLWKTCSAT AQYYPNTSNI PDYYSYNNLK EALKTLANTI VKVQWYEGSE WCYRIIRLDK TTKEQKLTYS DPNFDAEWLQ SKPLQTKICD YGSFLAVGNN NTQKRELAGF LANISHETGG GTIGGEVSND SLTGLYFNEE VGFIGSTAIG YVQSTGTNYL PVAGKSYHGR GPIQLSYNYN YGLCSDVILG DSSILLKNPE LLTSNGVMGF MTGIWFWMTP QPPKPSCHEV ISGIWQPKPG SPNAQYNGNF GLTIVIINNE SGQSENGTGA VARRARYYRI FTQKMNANIQ GEQCDTVGMT TFVQ
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